RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 TMC7Q7Z402 723 aa19.04■□□□□ 0.64
SMARCAL1-209ENST00000444508 DDX53Q86TM3 631 aaKnown RBP19.04■□□□□ 0.64
SMARCAL1-209ENST00000444508 POMGNT1Q8WZA1 660 aa19.04■□□□□ 0.64
SMARCAL1-209ENST00000444508 CCDC47Q96A33 483 aaKnown RBP19.04■□□□□ 0.64
SMARCAL1-209ENST00000444508 TCF25Q9BQ70 676 aa19.04■□□□□ 0.64
SMARCAL1-209ENST00000444508 CXCL16Q9H2A7 254 aa19.04■□□□□ 0.64
SMARCAL1-209ENST00000444508 NGRNQ9NPE2 291 aaKnown RBP19.04■□□□□ 0.64
SMARCAL1-209ENST00000444508 EXOC1Q9NV70 894 aa19.04■□□□□ 0.64
SMARCAL1-209ENST00000444508 SLC38A7Q9NVC3 462 aa19.04■□□□□ 0.64
SMARCAL1-209ENST00000444508 EYSQ5T1H1 3165 aa19.04■□□□□ 0.64
SMARCAL1-209ENST00000444508 TRIP11Q15643 1979 aa19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 SMIM28A0A1B0GU29 152 aa19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 CASTOR2A6NHX0 329 aa19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 TISP43B9A030 160 aa19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 EIF3DO15371 548 aaKnown RBP eCLIP19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 ERVFC1P60507 584 aa19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 FAM160A1Q05DH4 1040 aa19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 XKR4Q5GH76 650 aa19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 PLPP4Q5VZY2 271 aa19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 ALKAL1Q6UXT8 129 aa19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 BCL7CQ8WUZ0 217 aaPredicted RBP19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 PPP1R10Q96QC0 940 aaKnown RBP19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 RPF1Q9H9Y2 349 aaKnown RBP19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 PLEKHA5Q9HAU0 1116 aa19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 CNTN3Q9P232 1028 aa19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 AGO2Q9UKV8 859 aaKnown RBP19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 STYXL1Q9Y6J8 313 aa19.03■□□□□ 0.64
SMARCAL1-209ENST00000444508 UBE4BO95155 1302 aa19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 FSCN2O14926 492 aa19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 CXCL8P10145 99 aa19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 KCNE1P15382 129 aa19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 CA8P35219 290 aa19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 PPP2R3AQ06190 1150 aa19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 EHHADHQ08426 723 aa19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 HSP90AA2PQ14568 343 aaPredicted RBP19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 SMC1AQ14683 1233 aaKnown RBP19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 NAB2Q15742 525 aa19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 SLC10A6Q3KNW5 377 aa19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 FMR1NBQ8N0W7 255 aaPredicted RBP19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 VPS52Q8N1B4 723 aa19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 GLIS3Q8NEA6 775 aa19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 IPO9Q96P70 1041 aaKnown RBP19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 IKZF4Q9H2S9 585 aa19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 SLC39A2Q9NP94 309 aa19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 MARCH5Q9NX47 278 aa19.02■□□□□ 0.64
SMARCAL1-209ENST00000444508 REV3LO60673 3130 aa19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 NCK2O43639 380 aa19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 KLRC4O43908 158 aa19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 FAM189A1O60320 539 aa19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 TADA2AO75478 443 aa19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 TNFSF9P41273 254 aa19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 PSMD2Q13200 908 aa19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 KMT5BQ4FZB7 885 aa19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 ZBTB41Q5SVQ8 909 aa19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 EPM2AIP1Q7L775 607 aaPredicted RBP19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 ZNF507Q8TCN5 953 aa19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 UROC1Q96N76 676 aa19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 CPSF3Q9UKF6 684 aaKnown RBP19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 ADAM28Q9UKQ2 775 aa19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 COG5Q9UP83 839 aa19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 PCDHGC5Q9Y5F6 944 aa19.01■□□□□ 0.63
SMARCAL1-209ENST00000444508 RPN1P04843 607 aaKnown RBP19■□□□□ 0.63
SMARCAL1-209ENST00000444508 GARTP22102 1010 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 ADSSP30520 456 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 NRIP1P48552 1158 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 ACOT2P49753 483 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 ENOX2Q16206 610 aaKnown RBP19■□□□□ 0.63
SMARCAL1-209ENST00000444508 CD302Q8IX05 232 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 TMEM87AQ8NBN3 555 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 RABGGTAQ92696 567 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 HLA-CQ95604 372 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 FAM212AQ96EL1 285 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 ZMAT2Q96NC0 199 aaKnown RBP19■□□□□ 0.63
SMARCAL1-209ENST00000444508 PAAF1Q9BRP4 392 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 ZBP1Q9H171 429 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 IGFLR1Q9H665 355 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 TLE6Q9H808 572 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 PRDM6Q9NQX0 595 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 TSHZ2Q9NRE2 1034 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 THEGQ9P2T0 379 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 GTF3C5Q9Y5Q8 519 aaPredicted RBP19■□□□□ 0.63
SMARCAL1-209ENST00000444508 PRUNE2Q8WUY3 3088 aa19■□□□□ 0.63
SMARCAL1-209ENST00000444508 TTC26A0AVF1 554 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 FSD2A1L4K1 749 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 F8W810 466 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 MEFVO15553 781 aaPredicted RBP18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 CXCL14O95715 111 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 LDHAP00338 332 aaKnown RBP18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 SOD2P04179 222 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 PRR29P0C7W0 189 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 CTSAP10619 480 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 HYAL1Q12794 435 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 DPYDQ12882 1025 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 SNW1Q13573 536 aaKnown RBP18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 ARMCX5Q6P1M9 558 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 EP400NLQ6ZTU2 488 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 ADGRD2Q7Z7M1 963 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 RBM23Q86U06 439 aaKnown RBP18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 ENGASEQ8NFI3 743 aa18.99■□□□□ 0.63
SMARCAL1-209ENST00000444508 SCFD1Q8WVM8 642 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms