RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 MIOSQ9NXC5 875 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 CGNQ9P2M7 1197 aaKnown RBP11.82□□□□□ -0.52
HDAC6-211ENST00000443563 HCSTQ9UBK5 93 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 DNAJB4Q9UDY4 337 aa11.82□□□□□ -0.52
HDAC6-211ENST00000443563 AGO2Q9UKV8 859 aaKnown RBP11.82□□□□□ -0.52
HDAC6-211ENST00000443563 ANKRD63C9JTQ0 380 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 PTGESO14684 152 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 NRP1O14786 923 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 XPOTO43592 962 aaKnown RBP11.81□□□□□ -0.52
HDAC6-211ENST00000443563 KLRC4O43908 158 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 KINO60870 393 aaKnown RBP11.81□□□□□ -0.52
HDAC6-211ENST00000443563 PRPF6O94906 941 aaKnown RBP11.81□□□□□ -0.52
HDAC6-211ENST00000443563 SMC2O95347 1197 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 SLC34A2O95436 690 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 KCNE1P15382 129 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 SLC11A1P49279 550 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 PPP2R3AQ06190 1150 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 DPYDQ12882 1025 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 SNW1Q13573 536 aaKnown RBP11.81□□□□□ -0.52
HDAC6-211ENST00000443563 KCNB1Q14721 858 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 KMT5BQ4FZB7 885 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 XKR4Q5GH76 650 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 SLC39A4Q6P5W5 647 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 ALKAL1Q6UXT8 129 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 CLEC17AQ6ZS10 378 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 EPM2AIP1Q7L775 607 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-211ENST00000443563 ELOA2Q8IYF1 753 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-211ENST00000443563 MICALL1Q8N3F8 863 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 GSTCDQ8NEC7 633 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 GOLGA5Q8TBA6 731 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 IGSF21Q96ID5 467 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 SNX27Q96L92 541 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 GBP4Q96PP9 640 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 HAPLN2Q9GZV7 340 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 NSUN3Q9H649 340 aaKnown RBP11.81□□□□□ -0.52
HDAC6-211ENST00000443563 SLC39A2Q9NP94 309 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 NGRNQ9NPE2 291 aaKnown RBP11.81□□□□□ -0.52
HDAC6-211ENST00000443563 TLR9Q9NR96 1032 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 CNTN3Q9P232 1028 aa11.81□□□□□ -0.52
HDAC6-211ENST00000443563 ATG2AQ2TAZ0 1938 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 XIRP2A4UGR9 3374 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 SMIM28A0A1B0GU29 152 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 FSD2A1L4K1 749 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 NT5C1B-RDH14C9J2C7 533 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 NCK2O43639 380 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 RHOBTB3O94955 611 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 PBX3P40426 434 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 KCNA1Q09470 495 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 BMT2Q1RMZ1 405 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 ARMCX5Q6P1M9 558 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 HS2ST1Q7LGA3 356 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 TMC7Q7Z402 723 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 DDX53Q86TM3 631 aaKnown RBP11.8□□□□□ -0.52
HDAC6-211ENST00000443563 MICAL1Q8TDZ2 1067 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 HPS3Q969F9 1004 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 PPP1R10Q96QC0 940 aaKnown RBP11.8□□□□□ -0.52
HDAC6-211ENST00000443563 FGFBP2Q9BYJ0 223 aa11.8□□□□□ -0.52
HDAC6-211ENST00000443563 CPSF3Q9UKF6 684 aaKnown RBP11.8□□□□□ -0.52
HDAC6-211ENST00000443563 TTC26A0AVF1 554 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 GOLGA6L22H0YM25 854 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 FAM189A1O60320 539 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 GADD45BO75293 160 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-211ENST00000443563 PRPF40AO75400 957 aaKnown RBP11.79□□□□□ -0.52
HDAC6-211ENST00000443563 IL18RAPO95256 599 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 PRR29P0C7W0 189 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 CXCL8P10145 99 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 ADSSP30520 456 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 RPL9P32969 192 aaKnown RBP11.79□□□□□ -0.52
HDAC6-211ENST00000443563 SMC1AQ14683 1233 aaKnown RBP11.79□□□□□ -0.52
HDAC6-211ENST00000443563 KNOP1Q1ED39 458 aaKnown RBP11.79□□□□□ -0.52
HDAC6-211ENST00000443563 SLC10A6Q3KNW5 377 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 SEZ6Q53EL9 994 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 SCFD1Q8WVM8 642 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 SMARCE1Q969G3 411 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 DDX27Q96GQ7 796 aaKnown RBP11.79□□□□□ -0.52
HDAC6-211ENST00000443563 GSDMAQ96QA5 445 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 ASB7Q9H672 318 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 KIAA1586Q9HCI6 787 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 ENTPD7Q9NQZ7 604 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 ADAM28Q9UKQ2 775 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 SSX2IPQ9Y2D8 614 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 PRG3Q9Y2Y8 225 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-211ENST00000443563 DERAQ9Y315 318 aa11.79□□□□□ -0.52
HDAC6-211ENST00000443563 ANK1P16157 1881 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 UNC80Q8N2C7 3258 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 CASTOR2A6NHX0 329 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 TRAPPC3O43617 180 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 EXTL3O43909 919 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 B4GALT3O60512 393 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 TADA2AO75478 443 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 ADRB2P07550 413 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 CYP3A5P20815 502 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 DNAJB1P25685 340 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 TNFSF9P41273 254 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 ACOT2P49753 483 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 ELAVL2Q12926 359 aaKnown RBP11.78□□□□□ -0.52
HDAC6-211ENST00000443563 STK4Q13043 487 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 PNOCQ13519 176 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 CAMK1Q14012 370 aa11.78□□□□□ -0.52
HDAC6-211ENST00000443563 SURF1Q15526 300 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms