RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 XKR4Q5GH76 650 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 COLGALT2Q8IYK4 626 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 KIAA0895Q8NCT3 520 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 SPPL3Q8TCT6 385 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 ERCC4Q92889 916 aaPredicted RBP13.44□□□□□ -0.26
USP1-203ENST00000442679 SMARCE1Q969G3 411 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 SNX27Q96L92 541 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 TMEM175Q9BSA9 504 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 PCIF1Q9H4Z3 704 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 RPF1Q9H9Y2 349 aaKnown RBP13.44□□□□□ -0.26
USP1-203ENST00000442679 RMND1Q9NWS8 449 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 FAN1Q9Y2M0 1017 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 PCDHA5Q9Y5H7 936 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 FNDC1Q4ZHG4 1894 aaPredicted RBP13.44□□□□□ -0.26
USP1-203ENST00000442679 GOLGA6L22H0YM25 854 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 NRP1O14786 923 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 MEFVO15553 781 aaPredicted RBP13.43□□□□□ -0.26
USP1-203ENST00000442679 TGFB1I1O43294 461 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 KIF20AO95235 890 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 CXCL8P10145 99 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 KCNE1P15382 129 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 SNRPFP62306 86 aaKnown RBP13.43□□□□□ -0.26
USP1-203ENST00000442679 PLCB3Q01970 1234 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 KRT17Q04695 432 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 ENOX2Q16206 610 aaKnown RBP13.43□□□□□ -0.26
USP1-203ENST00000442679 PTPROQ16827 1216 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 KNOP1Q1ED39 458 aaKnown RBP13.43□□□□□ -0.26
USP1-203ENST00000442679 GLRA4Q5JXX5 417 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 ARMCX5Q6P1M9 558 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 HS2ST1Q7LGA3 356 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 SLC39A11Q8N1S5 342 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 SPATA20Q8TB22 786 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 FAM212AQ96EL1 285 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 SAAL1Q96ER3 474 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 ZMAT2Q96NC0 199 aaKnown RBP13.43□□□□□ -0.26
USP1-203ENST00000442679 GSDMAQ96QA5 445 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 PPP1R10Q96QC0 940 aaKnown RBP13.43□□□□□ -0.26
USP1-203ENST00000442679 CBWD1Q9BRT8 395 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 FAM213AQ9BRX8 229 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 PLEKHA5Q9HAU0 1116 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 LMCD1Q9NZU5 365 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 CNTN3Q9P232 1028 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 PUF60Q9UHX1 559 aaKnown RBP13.43□□□□□ -0.26
USP1-203ENST00000442679 CPSF3Q9UKF6 684 aaKnown RBP13.43□□□□□ -0.26
USP1-203ENST00000442679 MTCH2Q9Y6C9 303 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 TRANK1O15050 2925 aa13.43□□□□□ -0.26
USP1-203ENST00000442679 TTC26A0AVF1 554 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 LACTBL1A8MY62 500 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 LDHAP00338 332 aaKnown RBP13.42□□□□□ -0.26
USP1-203ENST00000442679 POU3F3P20264 500 aaPredicted RBP13.42□□□□□ -0.26
USP1-203ENST00000442679 DNAJB1P25685 340 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 UBE3AQ05086 875 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 PPP2R3AQ06190 1150 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 TUSC3Q13454 348 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 NAB2Q15742 525 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 CRELD2Q6UXH1 353 aaPredicted RBP13.42□□□□□ -0.26
USP1-203ENST00000442679 ZSWIM2Q8NEG5 633 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 NOC3LQ8WTT2 800 aaKnown RBP13.42□□□□□ -0.26
USP1-203ENST00000442679 POF1BQ8WVV4 589 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 MRPL38Q96DV4 380 aaKnown RBP13.42□□□□□ -0.26
USP1-203ENST00000442679 TMEM169Q96HH4 297 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 IGSF21Q96ID5 467 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 COLEC11Q9BWP8 271 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 LMAN2LQ9H0V9 348 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 AGPAT3Q9NRZ7 376 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 CGNQ9P2M7 1197 aaKnown RBP13.42□□□□□ -0.26
USP1-203ENST00000442679 MAPK8IP1Q9UQF2 711 aa13.42□□□□□ -0.26
USP1-203ENST00000442679 PRG3Q9Y2Y8 225 aaPredicted RBP13.42□□□□□ -0.26
USP1-203ENST00000442679 GOLGA8IPA6NC78 632 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 CASTOR2A6NHX0 329 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 GOLGA8JA6NMD2 632 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 TULP1O00294 542 aaPredicted RBP13.41□□□□□ -0.26
USP1-203ENST00000442679 KIAA0391O15091 583 aaKnown RBP13.41□□□□□ -0.26
USP1-203ENST00000442679 CLIC2O15247 247 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 EXTL3O43909 919 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 ADRB2P07550 413 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 POU5F1Q01860 360 aaKnown RBP13.41□□□□□ -0.26
USP1-203ENST00000442679 SPAG1Q07617 926 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 CAMK4Q16566 473 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 ZNF658Q5TYW1 1059 aaPredicted RBP13.41□□□□□ -0.26
USP1-203ENST00000442679 TMEM173Q86WV6 379 aaPredicted RBP13.41□□□□□ -0.26
USP1-203ENST00000442679 CD302Q8IX05 232 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 GOLGA5Q8TBA6 731 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 BCL7CQ8WUZ0 217 aaPredicted RBP13.41□□□□□ -0.26
USP1-203ENST00000442679 RABGGTAQ92696 567 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 C18orf25Q96B23 403 aaPredicted RBP13.41□□□□□ -0.26
USP1-203ENST00000442679 GTPBP4Q9BZE4 634 aaKnown RBP13.41□□□□□ -0.26
USP1-203ENST00000442679 KCTD10Q9H3F6 313 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 SLC38A7Q9NVC3 462 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 HSPBP1Q9NZL4 362 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 LZTS1Q9Y250 596 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 STXBP5LQ9Y2K9 1186 aa13.41□□□□□ -0.26
USP1-203ENST00000442679 PDXKO00764 312 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 TADA2AO75478 443 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 CSPG5O95196 566 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 CYP2J2P51589 502 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 CAMK1Q14012 370 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 HSP90AA2PQ14568 343 aaPredicted RBP13.4□□□□□ -0.26
USP1-203ENST00000442679 ISM2Q6H9L7 571 aa13.4□□□□□ -0.26
USP1-203ENST00000442679 DDX53Q86TM3 631 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms