RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 AMHR2Q16671 573 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 SLC27A1Q6PCB7 646 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 PRR23CQ6ZRP0 262 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 OTUD6AQ7L8S5 288 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 CEP57Q86XR8 500 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 C4orf19Q8IY42 314 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 PAAF1Q9BRP4 392 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 SLC26A6Q9BXS9 759 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 AVENQ9NQS1 362 aaPredicted RBP11.11□□□□□ -0.63
SYN3-204ENST00000441821 BMP2KQ9NSY1 1161 aaPredicted RBP11.11□□□□□ -0.63
SYN3-204ENST00000441821 KLK14Q9P0G3 267 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 DDX25Q9UHL0 483 aaKnown RBP11.11□□□□□ -0.63
SYN3-204ENST00000441821 ANGPTL2Q9UKU9 493 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 VAV3Q9UKW4 847 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 PCDHA4Q9UN74 947 aa11.11□□□□□ -0.63
SYN3-204ENST00000441821 MRPS23Q9Y3D9 190 aaKnown RBP11.11□□□□□ -0.63
SYN3-204ENST00000441821 NOTCH4Q99466 2003 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 A0A1B0GUA9 196 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 M0R2N6 131 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 KIF4AO95239 1232 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 IFNAR1P17181 557 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 YWHABP31946 246 aaKnown RBP11.1□□□□□ -0.63
SYN3-204ENST00000441821 ELAVL2Q12926 359 aaKnown RBP11.1□□□□□ -0.63
SYN3-204ENST00000441821 TANGO2Q6ICL3 276 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 PRR23BQ6ZRT6 265 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 Q6ZUG5 572 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 HASPINQ8TF76 798 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 ING5Q8WYH8 240 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 MCRS1Q96EZ8 462 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 FAM20AQ96MK3 541 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 MTRQ99707 1265 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 NFKBIZQ9BYH8 718 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 SLKQ9H2G2 1235 aaPredicted RBP11.1□□□□□ -0.63
SYN3-204ENST00000441821 CACNG4Q9UBN1 327 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 PARP2Q9UGN5 583 aa11.1□□□□□ -0.63
SYN3-204ENST00000441821 NDRG2Q9UN36 371 aaKnown RBP11.1□□□□□ -0.63
SYN3-204ENST00000441821 SLC37A4O43826 429 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 NPTXRO95502 500 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 RHOP08100 348 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 PMLP29590 882 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 CNR2P34972 360 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 OR1D2P34982 312 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 SHC2P98077 582 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 DMWDQ09019 674 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 SIM2Q14190 667 aaPredicted RBP11.09□□□□□ -0.63
SYN3-204ENST00000441821 EPHA7Q15375 998 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 SLC5A9Q2M3M2 681 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 XKR9Q5GH70 373 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 POTEHQ6S545 545 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 FBXL16Q8N461 479 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 BRF1Q92994 677 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 LXNQ9BS40 222 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 BRD9Q9H8M2 597 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 LMAN1LQ9HAT1 526 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 KCNMB3Q9NPA1 279 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 TRPV5Q9NQA5 729 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 XPNPEP1Q9NQW7 623 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 BAHCC1Q9P281 2608 aa11.09□□□□□ -0.63
SYN3-204ENST00000441821 CASTOR2A6NHX0 329 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 ZBTB39O15060 712 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 B4GALT5O43286 388 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 HRO43593 1189 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 GDF9O60383 454 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 PTPN2P17706 415 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 FCARP24071 287 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 ARL2P36404 184 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 CXCL12P48061 93 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 CAPSQ13938 189 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.08□□□□□ -0.64
SYN3-204ENST00000441821 CENPQQ7L2Z9 268 aaPredicted RBP11.08□□□□□ -0.64
SYN3-204ENST00000441821 CDR2LQ86X02 465 aaPredicted RBP11.08□□□□□ -0.64
SYN3-204ENST00000441821 MAP4K3Q8IVH8 894 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 BLIDQ8IZY5 108 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 DAGLBQ8NCG7 672 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 FAM3CQ92520 227 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 IRF7Q92985 503 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 TRMT61BQ9BVS5 477 aaKnown RBP11.08□□□□□ -0.64
SYN3-204ENST00000441821 ZSWIM4Q9H7M6 989 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 ZFP14Q9HCL3 533 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 RGL1Q9NZL6 768 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 MTRRQ9UBK8 725 aa11.08□□□□□ -0.64
SYN3-204ENST00000441821 RALYQ9UKM9 306 aaKnown RBP11.08□□□□□ -0.64
SYN3-204ENST00000441821 ARID2Q68CP9 1835 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 ARHGEF37A1IGU5 675 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 PTGESO14684 152 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 TBX3O15119 743 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 MICAL2O94851 1124 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 PAPSS2O95340 614 aaPredicted RBP11.07□□□□□ -0.64
SYN3-204ENST00000441821 THP07101 528 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 CHRNB1P11230 501 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 CPA1P15085 419 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 CEBPBP17676 345 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 FGFR3P22607 806 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 LIMK1P53667 647 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 SATB1Q01826 763 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 SPIRE1Q08AE8 756 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 GRM2Q14416 872 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 NAB2Q15742 525 aa11.07□□□□□ -0.64
SYN3-204ENST00000441821 N4BP2L1Q5TBK1 243 aaPredicted RBP11.07□□□□□ -0.64
SYN3-204ENST00000441821 IL31Q6EBC2 164 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms