RNA–Protein interactions for RNA: ENST00000440813.1

TSSC4-206, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-206ENST00000440813 CXCL8P10145 99 aa22.05■■□□□ 1.12
TSSC4-206ENST00000440813 IRS1P35568 1242 aa22.05■■□□□ 1.12
TSSC4-206ENST00000440813 SNW1Q13573 536 aaKnown RBP22.05■■□□□ 1.12
TSSC4-206ENST00000440813 KANK3Q6NY19 840 aa22.05■■□□□ 1.12
TSSC4-206ENST00000440813 ALKAL1Q6UXT8 129 aa22.05■■□□□ 1.12
TSSC4-206ENST00000440813 MICAL1Q8TDZ2 1067 aa22.05■■□□□ 1.12
TSSC4-206ENST00000440813 POMGNT1Q8WZA1 660 aa22.05■■□□□ 1.12
TSSC4-206ENST00000440813 CCDC34Q96HJ3 373 aa22.05■■□□□ 1.12
TSSC4-206ENST00000440813 SNX27Q96L92 541 aa22.05■■□□□ 1.12
TSSC4-206ENST00000440813 TMEM206Q9H813 350 aa22.05■■□□□ 1.12
TSSC4-206ENST00000440813 TLR9Q9NR96 1032 aa22.05■■□□□ 1.12
TSSC4-206ENST00000440813 AGO2Q9UKV8 859 aaKnown RBP22.05■■□□□ 1.12
TSSC4-206ENST00000440813 STYXL1Q9Y6J8 313 aa22.05■■□□□ 1.12
TSSC4-206ENST00000440813 SMIM28A0A1B0GU29 152 aa22.04■■□□□ 1.12
TSSC4-206ENST00000440813 CASTOR2A6NHX0 329 aa22.04■■□□□ 1.12
TSSC4-206ENST00000440813 EIF3DO15371 548 aaKnown RBP eCLIP22.04■■□□□ 1.12
TSSC4-206ENST00000440813 MEFVO15553 781 aaPredicted RBP22.04■■□□□ 1.12
TSSC4-206ENST00000440813 ADSSP30520 456 aa22.04■■□□□ 1.12
TSSC4-206ENST00000440813 ERVFC1P60507 584 aa22.04■■□□□ 1.12
TSSC4-206ENST00000440813 DPYDQ12882 1025 aa22.04■■□□□ 1.12
TSSC4-206ENST00000440813 TUSC3Q13454 348 aa22.04■■□□□ 1.12
TSSC4-206ENST00000440813 POSTNQ15063 836 aa22.04■■□□□ 1.12
TSSC4-206ENST00000440813 SKIV2LQ15477 1246 aaKnown RBP22.04■■□□□ 1.12
TSSC4-206ENST00000440813 KYAT1Q16773 422 aa22.04■■□□□ 1.12
TSSC4-206ENST00000440813 SLC10A6Q3KNW5 377 aa22.04■■□□□ 1.12
TSSC4-206ENST00000440813 TIGD5Q53EQ6 642 aa22.04■■□□□ 1.12
TSSC4-206ENST00000440813 EPM2AIP1Q7L775 607 aaPredicted RBP22.04■■□□□ 1.12
TSSC4-206ENST00000440813 TMEM87AQ8NBN3 555 aa22.04■■□□□ 1.12
TSSC4-206ENST00000440813 LZTS1Q9Y250 596 aa22.04■■□□□ 1.12
TSSC4-206ENST00000440813 PCDHGC5Q9Y5F6 944 aa22.04■■□□□ 1.12
TSSC4-206ENST00000440813 CITO14578 2027 aa22.04■■□□□ 1.12
TSSC4-206ENST00000440813 EYSQ5T1H1 3165 aa22.03■■□□□ 1.12
TSSC4-206ENST00000440813 F8W810 466 aa22.03■■□□□ 1.12
TSSC4-206ENST00000440813 FAM189A1O60320 539 aa22.03■■□□□ 1.12
TSSC4-206ENST00000440813 HOXD13P35453 343 aa22.03■■□□□ 1.12
TSSC4-206ENST00000440813 ACOT2P49753 483 aa22.03■■□□□ 1.12
TSSC4-206ENST00000440813 NAB2Q15742 525 aa22.03■■□□□ 1.12
TSSC4-206ENST00000440813 XKR4Q5GH76 650 aa22.03■■□□□ 1.12
TSSC4-206ENST00000440813 TCEAL5Q5H9L2 206 aa22.03■■□□□ 1.12
TSSC4-206ENST00000440813 NELFCDQ8IXH7 590 aa22.03■■□□□ 1.12
TSSC4-206ENST00000440813 ZNF507Q8TCN5 953 aa22.03■■□□□ 1.12
TSSC4-206ENST00000440813 ZMAT2Q96NC0 199 aaKnown RBP22.03■■□□□ 1.12
TSSC4-206ENST00000440813 PPP1R10Q96QC0 940 aaKnown RBP22.03■■□□□ 1.12
TSSC4-206ENST00000440813 PAAF1Q9BRP4 392 aa22.03■■□□□ 1.12
TSSC4-206ENST00000440813 COLEC11Q9BWP8 271 aa22.03■■□□□ 1.12
TSSC4-206ENST00000440813 NSUN3Q9H649 340 aaKnown RBP22.03■■□□□ 1.12
TSSC4-206ENST00000440813 RPF1Q9H9Y2 349 aaKnown RBP22.03■■□□□ 1.12
TSSC4-206ENST00000440813 CNTN3Q9P232 1028 aa22.03■■□□□ 1.12
TSSC4-206ENST00000440813 ATG2AQ2TAZ0 1938 aa22.02■■□□□ 1.12
TSSC4-206ENST00000440813 STK4Q13043 487 aa22.02■■□□□ 1.12
TSSC4-206ENST00000440813 PSMD2Q13200 908 aa22.02■■□□□ 1.12
TSSC4-206ENST00000440813 ENOX2Q16206 610 aaKnown RBP22.02■■□□□ 1.12
TSSC4-206ENST00000440813 PLPP4Q5VZY2 271 aa22.02■■□□□ 1.12
TSSC4-206ENST00000440813 TMC7Q7Z402 723 aa22.02■■□□□ 1.12
TSSC4-206ENST00000440813 SCFD1Q8WVM8 642 aa22.02■■□□□ 1.12
TSSC4-206ENST00000440813 CCDC47Q96A33 483 aaKnown RBP22.02■■□□□ 1.12
TSSC4-206ENST00000440813 FAM212AQ96EL1 285 aa22.02■■□□□ 1.12
TSSC4-206ENST00000440813 TCF25Q9BQ70 676 aa22.02■■□□□ 1.12
TSSC4-206ENST00000440813 PCIF1Q9H4Z3 704 aa22.02■■□□□ 1.12
TSSC4-206ENST00000440813 ENTPD7Q9NQZ7 604 aa22.02■■□□□ 1.12
TSSC4-206ENST00000440813 MARCH5Q9NX47 278 aa22.02■■□□□ 1.12
TSSC4-206ENST00000440813 CPSF3Q9UKF6 684 aaKnown RBP22.02■■□□□ 1.12
TSSC4-206ENST00000440813 PRPF40AO75400 957 aaKnown RBP22.01■■□□□ 1.11
TSSC4-206ENST00000440813 KCNE1P15382 129 aa22.01■■□□□ 1.11
TSSC4-206ENST00000440813 PPP2R3AQ06190 1150 aa22.01■■□□□ 1.11
TSSC4-206ENST00000440813 SPAG1Q07617 926 aa22.01■■□□□ 1.11
TSSC4-206ENST00000440813 PNOCQ13519 176 aa22.01■■□□□ 1.11
TSSC4-206ENST00000440813 ARMCX5Q6P1M9 558 aa22.01■■□□□ 1.11
TSSC4-206ENST00000440813 DDX53Q86TM3 631 aaKnown RBP22.01■■□□□ 1.11
TSSC4-206ENST00000440813 VPS52Q8N1B4 723 aa22.01■■□□□ 1.11
TSSC4-206ENST00000440813 NOC3LQ8WTT2 800 aaKnown RBP22.01■■□□□ 1.11
TSSC4-206ENST00000440813 SAAL1Q96ER3 474 aa22.01■■□□□ 1.11
TSSC4-206ENST00000440813 CBWD1Q9BRT8 395 aa22.01■■□□□ 1.11
TSSC4-206ENST00000440813 VN1R3Q9BXE9 311 aa22.01■■□□□ 1.11
TSSC4-206ENST00000440813 PLEKHA5Q9HAU0 1116 aa22.01■■□□□ 1.11
TSSC4-206ENST00000440813 GOLGA2P5Q9HBQ8 144 aa22.01■■□□□ 1.11
TSSC4-206ENST00000440813 TTC26A0AVF1 554 aa22■■□□□ 1.11
TSSC4-206ENST00000440813 LACTBL1A8MY62 500 aa22■■□□□ 1.11
TSSC4-206ENST00000440813 TULP1O00294 542 aaPredicted RBP22■■□□□ 1.11
TSSC4-206ENST00000440813 FSCN2O14926 492 aa22■■□□□ 1.11
TSSC4-206ENST00000440813 GARTP22102 1010 aa22■■□□□ 1.11
TSSC4-206ENST00000440813 CA8P35219 290 aa22■■□□□ 1.11
TSSC4-206ENST00000440813 SOX4Q06945 474 aaPredicted RBP22■■□□□ 1.11
TSSC4-206ENST00000440813 HSP90AA2PQ14568 343 aaPredicted RBP22■■□□□ 1.11
TSSC4-206ENST00000440813 ADGRD2Q7Z7M1 963 aa22■■□□□ 1.11
TSSC4-206ENST00000440813 KIAA0895Q8NCT3 520 aa22■■□□□ 1.11
TSSC4-206ENST00000440813 ZSWIM2Q8NEG5 633 aa22■■□□□ 1.11
TSSC4-206ENST00000440813 HASPINQ8TF76 798 aa22■■□□□ 1.11
TSSC4-206ENST00000440813 C18orf25Q96B23 403 aaPredicted RBP22■■□□□ 1.11
TSSC4-206ENST00000440813 TIGD1Q96MW7 591 aa22■■□□□ 1.11
TSSC4-206ENST00000440813 FAM213AQ9BRX8 229 aa22■■□□□ 1.11
TSSC4-206ENST00000440813 PRDM6Q9NQX0 595 aa22■■□□□ 1.11
TSSC4-206ENST00000440813 SLC38A7Q9NVC3 462 aa22■■□□□ 1.11
TSSC4-206ENST00000440813 UBE4BO95155 1302 aa22■■□□□ 1.11
TSSC4-206ENST00000440813 GOLGA8IPA6NC78 632 aa21.99■■□□□ 1.11
TSSC4-206ENST00000440813 GOLGA8JA6NMD2 632 aa21.99■■□□□ 1.11
TSSC4-206ENST00000440813 KINO60870 393 aaKnown RBP21.99■■□□□ 1.11
TSSC4-206ENST00000440813 UBE2HP62256 183 aa21.99■■□□□ 1.11
TSSC4-206ENST00000440813 PDE12Q6L8Q7 609 aaKnown RBP21.99■■□□□ 1.11
TSSC4-206ENST00000440813 CRELD2Q6UXH1 353 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms