RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 TDRD10Q5VZ19 366 aaKnown RBP12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 C15orf39Q6ZRI6 1047 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 CATSPER4Q7RTX7 472 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 FBXL13Q8NEE6 735 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 OR5B17Q8NGF7 314 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 SH3TC2Q8TF17 1288 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 SYN2Q92777 582 aaPredicted RBP12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 WNT8BQ93098 351 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 CCDC42Q96M95 316 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 PI4K2AQ9BTU6 479 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 GPR88Q9GZN0 384 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 DEF6Q9H4E7 631 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 UBE2TQ9NPD8 197 aaPredicted RBP12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 RAB20Q9NX57 234 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 AIPL1Q9NZN9 384 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 REXO2Q9Y3B8 237 aaKnown RBP12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 GRIN2DO15399 1336 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 F8VZ95 297 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 GFPT2O94808 682 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 VNN1O95497 513 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 SERPING1P05155 500 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 CXCL8P10145 99 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 MCF2P10911 925 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 DARSP14868 501 aaKnown RBP12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 GTF2F1P35269 517 aaKnown RBP eCLIP12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 HSP90AA2PQ14568 343 aaPredicted RBP12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 SNX17Q15036 470 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 ARHGEF6Q15052 776 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 PTPN14Q15678 1187 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 SLC9C1Q4G0N8 1177 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 SCARA3Q6AZY7 606 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 NYAP1Q6ZVC0 841 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 RNF180Q86T96 592 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 STK33Q9BYT3 514 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 LZTFL1Q9NQ48 299 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 TFR2Q9UP52 801 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 COQ4Q9Y3A0 265 aa12.4□□□□□ -0.42
SMPD4P2-201ENST00000440167 EIF3CLB5ME19 914 aaKnown RBP12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 ZNF263O14978 683 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 MEFVO15553 781 aaPredicted RBP12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 NPTXRO95502 500 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 HLA-DRAP01903 254 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 STAG3L1P0CL83 205 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 TNNT1P13805 278 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 STAT1P42224 750 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 PIK3CAP42336 1068 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 KIF11P52732 1056 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 CDC42EP1Q00587 391 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 CYP27A1Q02318 531 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 KLHL30Q0D2K2 578 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 ZACNQ401N2 412 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 IRF2BP2Q7Z5L9 587 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 CCDC170Q8IYT3 715 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 PPM1KQ8N3J5 372 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 PCSK9Q8NBP7 692 aaKnown RBP12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 TATDN2Q93075 761 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 VTI1AQ96AJ9 217 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 EIF3CQ99613 913 aaKnown RBP12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 BEGAINQ9BUH8 593 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 MTMR12Q9C0I1 747 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 HAUS4Q9H6D7 363 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 HMX1Q9NP08 348 aaPredicted RBP12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 MYO6Q9UM54 1294 aa12.39□□□□□ -0.43
SMPD4P2-201ENST00000440167 MYH10P35580 1976 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 A0A1B0GUA9 196 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 AKR1B10O60218 316 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 CLSTN1O94985 981 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 ABL1P00519 1130 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 MYCP01106 439 aaPredicted RBP12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 CTSHP09668 335 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 EIF4BP23588 611 aaKnown RBP12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 HOXA11P31270 313 aaPredicted RBP12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 SOX5P35711 763 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 ACLYP53396 1101 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 PRMT2P55345 433 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 LHX8Q68G74 356 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 SPOPLQ6IQ16 392 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 WDR49Q8IV35 697 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 EFCAB13Q8IY85 973 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 TMEM130Q8N3G9 435 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 NME8Q8N427 588 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 KREMEN1Q96MU8 473 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 NT5C1BQ96P26 610 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 ADPGKQ9BRR6 497 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 EIF2AQ9BY44 585 aaKnown RBP12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 RPF1Q9H9Y2 349 aaKnown RBP12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 CDY2AQ9Y6F7 541 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 HTTP42858 3142 aa12.38□□□□□ -0.43
SMPD4P2-201ENST00000440167 SSU72P8A0A1W2PR75 194 aa12.37□□□□□ -0.43
SMPD4P2-201ENST00000440167 LACTBL1A8MY62 500 aa12.37□□□□□ -0.43
SMPD4P2-201ENST00000440167 FOXN3O00409 490 aaPredicted RBP12.37□□□□□ -0.43
SMPD4P2-201ENST00000440167 EVI5O60447 810 aa12.37□□□□□ -0.43
SMPD4P2-201ENST00000440167 PHACTR2O75167 634 aa12.37□□□□□ -0.43
SMPD4P2-201ENST00000440167 FERP16591 822 aa12.37□□□□□ -0.43
SMPD4P2-201ENST00000440167 RFX1P22670 979 aa12.37□□□□□ -0.43
SMPD4P2-201ENST00000440167 CRYBB1P53674 252 aaPredicted RBP12.37□□□□□ -0.43
SMPD4P2-201ENST00000440167 MRPS6P82932 125 aaKnown RBP12.37□□□□□ -0.43
SMPD4P2-201ENST00000440167 TFAMQ00059 246 aaKnown RBP12.37□□□□□ -0.43
SMPD4P2-201ENST00000440167 PTK2Q05397 1052 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms