RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 CDR2LQ86X02 465 aaPredicted RBP8.57□□□□□ -1.04
VPS50-203ENST00000436177 PALB2Q86YC2 1186 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 GLYCTKQ8IVS8 523 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 SIX5Q8N196 739 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 FAM184AQ8NB25 1140 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 NSUN7Q8NE18 718 aaKnown RBP8.57□□□□□ -1.04
VPS50-203ENST00000436177 HDAC7Q8WUI4 952 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 TNFRSF25Q93038 417 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 C8orf76Q96K31 380 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 IFT74Q96LB3 600 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 PHOX2BQ99453 314 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 RAB34Q9BZG1 259 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 SMOC2Q9H3U7 446 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 WDR6Q9NNW5 1121 aaKnown RBP8.57□□□□□ -1.04
VPS50-203ENST00000436177 GPRC5CQ9NQ84 441 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 MARCH5Q9NX47 278 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 ZDHHC7Q9NXF8 308 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 PPP4R2Q9NY27 417 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 KLK14Q9P0G3 267 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 ADAM28Q9UKQ2 775 aa8.57□□□□□ -1.04
VPS50-203ENST00000436177 NOL7Q9UMY1 257 aaKnown RBP8.57□□□□□ -1.04
VPS50-203ENST00000436177 A0A1B0GUA9 196 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 CASTOR2A6NHX0 329 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 XYLBO75191 536 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 RFPL2O75678 378 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 LARGE1O95461 756 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 PRKCBP05771 671 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 SPATA31D3P0C874 917 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 FDPSP14324 419 aaKnown RBP8.56□□□□□ -1.04
VPS50-203ENST00000436177 CCT6AP40227 531 aaKnown RBP8.56□□□□□ -1.04
VPS50-203ENST00000436177 EFNA5P52803 228 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 TUSC3Q13454 348 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 AMHR2Q16671 573 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 DCAF4L1Q3SXM0 396 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 SPATA31D4Q6ZUB0 917 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 GET4Q7L5D6 327 aaPredicted RBP8.56□□□□□ -1.04
VPS50-203ENST00000436177 CEP57Q86XR8 500 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 GPR65Q8IYL9 337 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 TMEM105Q8N8V8 129 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 HASPINQ8TF76 798 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 NXPE3Q969Y0 559 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 B3GALT6Q96L58 329 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 RTP3Q9BQQ7 232 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 KCNK12Q9HB15 430 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 RXFP1Q9HBX9 757 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 NPDC1Q9NQX5 325 aaPredicted RBP8.56□□□□□ -1.04
VPS50-203ENST00000436177 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.56□□□□□ -1.04
VPS50-203ENST00000436177 POLIQ9UNA4 740 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 DUSP12Q9UNI6 340 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 LIMCH1Q9UPQ0 1083 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 KIF3AQ9Y496 699 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 FAM186AA6NE01 2351 aa8.56□□□□□ -1.04
VPS50-203ENST00000436177 SPTBN4Q9H254 2564 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 A0A087WWV3 80 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 F8W810 466 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 TGM5O43548 720 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 LILRB3O75022 631 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 RECQL4O94761 1208 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 C1RP00736 705 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 THP07101 528 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 NAMPTP43490 491 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 RBM25P49756 843 aaKnown RBP8.55□□□□□ -1.04
VPS50-203ENST00000436177 YARSP54577 528 aaKnown RBP8.55□□□□□ -1.04
VPS50-203ENST00000436177 HMGN5P82970 282 aaKnown RBP8.55□□□□□ -1.04
VPS50-203ENST00000436177 PSMD5Q16401 504 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 FAM171A1Q5VUB5 890 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 KIAA0319Q5VV43 1072 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 CDCA2Q69YH5 1023 aaPredicted RBP8.55□□□□□ -1.04
VPS50-203ENST00000436177 TAS1R1Q7RTX1 841 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 CATSPER3Q86XQ3 398 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 CCDC83Q8IWF9 413 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 RABGGTAQ92696 567 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 KIFAP3Q92845 792 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 NKD2Q969F2 451 aaPredicted RBP8.55□□□□□ -1.04
VPS50-203ENST00000436177 MTMR9Q96QG7 549 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 TTPALQ9BTX7 342 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 POLR3CQ9BUI4 534 aaPredicted RBP8.55□□□□□ -1.04
VPS50-203ENST00000436177 RHOBTB2Q9BYZ6 727 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 GPR62Q9BZJ7 368 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 FNIP2Q9P278 1114 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 EPS15L1Q9UBC2 864 aa8.55□□□□□ -1.04
VPS50-203ENST00000436177 DAXXQ9UER7 740 aaPredicted RBP8.55□□□□□ -1.04
VPS50-203ENST00000436177 ACKR2O00590 384 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 TRAPPC3O43617 180 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 MED24O75448 989 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 ZMYND10O75800 440 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 CFHP08603 1231 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 HNRNPA1P09651 372 aaKnown RBP eCLIP8.54□□□□□ -1.04
VPS50-203ENST00000436177 SPATA31C1P0DKV0 1188 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 SRFP11831 508 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 RPL17P18621 184 aaKnown RBP8.54□□□□□ -1.04
VPS50-203ENST00000436177 CYP11B2P19099 503 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 AOC1P19801 751 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 FSHRP23945 695 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 RPA1P27694 616 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 TRAPPC10P48553 1259 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 ZNF174Q15697 407 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 FAM187BQ17R55 369 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 TTC38Q5R3I4 469 aa8.54□□□□□ -1.04
VPS50-203ENST00000436177 PPM1LQ5SGD2 360 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms