RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 ACOT2P49753 483 aa16.91■□□□□ 0.3
TREX1-201ENST00000433541 CCDC85BQ15834 202 aaPredicted RBP16.91■□□□□ 0.3
TREX1-201ENST00000433541 ERCC4Q92889 916 aaPredicted RBP16.91■□□□□ 0.3
TREX1-201ENST00000433541 SAAL1Q96ER3 474 aa16.91■□□□□ 0.3
TREX1-201ENST00000433541 SNX27Q96L92 541 aa16.91■□□□□ 0.3
TREX1-201ENST00000433541 FAM213AQ9BRX8 229 aa16.91■□□□□ 0.3
TREX1-201ENST00000433541 HAPLN2Q9GZV7 340 aa16.91■□□□□ 0.3
TREX1-201ENST00000433541 PLAGL2Q9UPG8 496 aa16.91■□□□□ 0.3
TREX1-201ENST00000433541 PRRC2BQ5JSZ5 2229 aaKnown RBP16.9■□□□□ 0.3
TREX1-201ENST00000433541 ATG2AQ2TAZ0 1938 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 GOLGA8IPA6NC78 632 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 GOLGA8JA6NMD2 632 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 PTGESO14684 152 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 GRM6O15303 877 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 RHOBTB3O94955 611 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 EHHADHQ08426 723 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 STK4Q13043 487 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 TUSC3Q13454 348 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 ADGRE1Q14246 886 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 SKIV2LQ15477 1246 aaKnown RBP16.9■□□□□ 0.3
TREX1-201ENST00000433541 ZBTB41Q5SVQ8 909 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 EPM2AIP1Q7L775 607 aaPredicted RBP16.9■□□□□ 0.3
TREX1-201ENST00000433541 ZNF507Q8TCN5 953 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 SCFD1Q8WVM8 642 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 POF1BQ8WVV4 589 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 RABGGTAQ92696 567 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 KIF12Q96FN5 646 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 TMEM175Q9BSA9 504 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 ENTPD7Q9NQZ7 604 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 SLC38A7Q9NVC3 462 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 MAPK8IP1Q9UQF2 711 aa16.9■□□□□ 0.3
TREX1-201ENST00000433541 NRP1O14786 923 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 CLIC2O15247 247 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 INPPL1O15357 1258 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 LPXNO60711 386 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 LDHAP00338 332 aaKnown RBP16.89■□□□□ 0.29
TREX1-201ENST00000433541 GALTP07902 379 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 GARTP22102 1010 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 CYP2J2P51589 502 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 SPAG1Q07617 926 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 BMS1Q14692 1282 aaKnown RBP16.89■□□□□ 0.29
TREX1-201ENST00000433541 KCNB1Q14721 858 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 CAMK4Q16566 473 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 KNOP1Q1ED39 458 aaKnown RBP16.89■□□□□ 0.29
TREX1-201ENST00000433541 CLEC17AQ6ZS10 378 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 COLGALT2Q8IYK4 626 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 SLC39A11Q8N1S5 342 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 KIAA0895Q8NCT3 520 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 MRPL38Q96DV4 380 aaKnown RBP16.89■□□□□ 0.29
TREX1-201ENST00000433541 GSDMAQ96QA5 445 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 CBWD1Q9BRT8 395 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 COLEC11Q9BWP8 271 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 CXCL16Q9H2A7 254 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 TLR9Q9NR96 1032 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 CACNG4Q9UBN1 327 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 PCDHA5Q9Y5H7 936 aa16.89■□□□□ 0.29
TREX1-201ENST00000433541 MYO7AQ13402 2215 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 SMIM28A0A1B0GU29 152 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 XPOTO43592 962 aaKnown RBP16.88■□□□□ 0.29
TREX1-201ENST00000433541 B4GALT3O60512 393 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 UBE3AQ05086 875 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 TIGD5Q53EQ6 642 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 ISM2Q6H9L7 571 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 TMC7Q7Z402 723 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 GSTCDQ8NEC7 633 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 MAFAQ8NHW3 353 aaPredicted RBP16.88■□□□□ 0.29
TREX1-201ENST00000433541 GOLGA5Q8TBA6 731 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 SPPL3Q8TCT6 385 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 HASPINQ8TF76 798 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 IGSF21Q96ID5 467 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 LMAN2LQ9H0V9 348 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 PLEKHA5Q9HAU0 1116 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 CNTN3Q9P232 1028 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 STXBP5LQ9Y2K9 1186 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 MTCH2Q9Y6C9 303 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 STYXL1Q9Y6J8 313 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 CDH23Q9H251 3354 aa16.88■□□□□ 0.29
TREX1-201ENST00000433541 LACTBL1A8MY62 500 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 KIAA0391O15091 583 aaKnown RBP16.87■□□□□ 0.29
TREX1-201ENST00000433541 TADA2AO75478 443 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 ADSSP30520 456 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 DSC1Q08554 894 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 STIM1Q13586 685 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 HSP90AA2PQ14568 343 aaPredicted RBP16.87■□□□□ 0.29
TREX1-201ENST00000433541 ENOX2Q16206 610 aaKnown RBP16.87■□□□□ 0.29
TREX1-201ENST00000433541 SLC10A6Q3KNW5 377 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 PLPP4Q5VZY2 271 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 EP400NLQ6ZTU2 488 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 SMYD4Q8IYR2 804 aaPredicted RBP16.87■□□□□ 0.29
TREX1-201ENST00000433541 GPD1LQ8N335 351 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 PPP2R3CQ969Q6 453 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 TCF25Q9BQ70 676 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 GOLGA2P5Q9HBQ8 144 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 AGPAT3Q9NRZ7 376 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 RBAKQ9NYW8 714 aaPredicted RBP16.87■□□□□ 0.29
TREX1-201ENST00000433541 HSPBP1Q9NZL4 362 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 LMCD1Q9NZU5 365 aa16.87■□□□□ 0.29
TREX1-201ENST00000433541 CPSF3Q9UKF6 684 aaKnown RBP16.87■□□□□ 0.29
TREX1-201ENST00000433541 BIN1O00499 593 aa16.86■□□□□ 0.29
TREX1-201ENST00000433541 CALUO43852 315 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms