RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 SMG7Q92540 1137 aaKnown RBP9.2□□□□□ -0.94
CDH13-203ENST00000431540 HAS1Q92839 578 aa9.2□□□□□ -0.94
CDH13-203ENST00000431540 IER2Q9BTL4 223 aa9.2□□□□□ -0.94
CDH13-203ENST00000431540 DDX23Q9BUQ8 820 aaKnown RBP9.2□□□□□ -0.94
CDH13-203ENST00000431540 FAM126AQ9BYI3 521 aaPredicted RBP9.2□□□□□ -0.94
CDH13-203ENST00000431540 TRIM6Q9C030 488 aaPredicted RBP9.2□□□□□ -0.94
CDH13-203ENST00000431540 MINDY3Q9H8M7 445 aa9.2□□□□□ -0.94
CDH13-203ENST00000431540 AVENQ9NQS1 362 aaPredicted RBP9.2□□□□□ -0.94
CDH13-203ENST00000431540 MARCH5Q9NX47 278 aa9.2□□□□□ -0.94
CDH13-203ENST00000431540 ADAM28Q9UKQ2 775 aa9.2□□□□□ -0.94
CDH13-203ENST00000431540 MAFFQ9ULX9 164 aa9.2□□□□□ -0.94
CDH13-203ENST00000431540 DCHS1Q96JQ0 3298 aa9.2□□□□□ -0.94
CDH13-203ENST00000431540 PATJQ8NI35 1801 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 RALGAPA1Q6GYQ0 2036 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 MEIS3P2A8K0S8 358 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 TERTO14746 1132 aaKnown RBP9.19□□□□□ -0.94
CDH13-203ENST00000431540 NCAM2O15394 837 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 PI15O43692 258 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 MARCH6O60337 910 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 TSPAN1O60635 241 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 MICAL2O94851 1124 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 POMCP01189 267 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 GBP2P32456 591 aaPredicted RBP9.19□□□□□ -0.94
CDH13-203ENST00000431540 OR1G1P47890 313 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 MLLT6P55198 1093 aaPredicted RBP9.19□□□□□ -0.94
CDH13-203ENST00000431540 NPEPPSP55786 919 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 CCT2P78371 535 aaKnown RBP9.19□□□□□ -0.94
CDH13-203ENST00000431540 TUSC3Q13454 348 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 PUM1Q14671 1186 aaKnown RBP eCLIP9.19□□□□□ -0.94
CDH13-203ENST00000431540 SWT1Q5T5J6 900 aaKnown RBP9.19□□□□□ -0.94
CDH13-203ENST00000431540 APBB1IPQ7Z5R6 666 aaPredicted RBP9.19□□□□□ -0.94
CDH13-203ENST00000431540 C1orf210Q8IVY1 113 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 GSTCDQ8NEC7 633 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 MCPH1Q8NEM0 835 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 PIK3R5Q8WYR1 880 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 ZNF707Q96C28 371 aaPredicted RBP9.19□□□□□ -0.94
CDH13-203ENST00000431540 ZNF668Q96K58 619 aaPredicted RBP9.19□□□□□ -0.94
CDH13-203ENST00000431540 YTHDC1Q96MU7 727 aaKnown RBP9.19□□□□□ -0.94
CDH13-203ENST00000431540 GAD1Q99259 594 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 LXNQ9BS40 222 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 PRR14Q9BWN1 585 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 GBP3Q9H0R5 595 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 C2orf40Q9H1Z8 148 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 PIDD1Q9HB75 910 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 BRMS1Q9HCU9 246 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 PRMT7Q9NVM4 692 aaPredicted RBP9.19□□□□□ -0.94
CDH13-203ENST00000431540 DLGAP2Q9P1A6 1054 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 KCNG1Q9UIX4 513 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.19□□□□□ -0.94
CDH13-203ENST00000431540 SF3B1O75533 1304 aaKnown RBP eCLIP9.19□□□□□ -0.94
CDH13-203ENST00000431540 PHLPP2Q6ZVD8 1323 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 VWA8A3KMH1 1905 aa9.19□□□□□ -0.94
CDH13-203ENST00000431540 KRBA1A5PL33 1030 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 TMEM189-UBE2V1I3L0A0 370 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 SPTLC1O15269 473 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 TGM5O43548 720 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 TRAPPC3O43617 180 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 CCNT1O60563 726 aaKnown RBP9.18□□□□□ -0.94
CDH13-203ENST00000431540 N4BP1O75113 896 aaKnown RBP9.18□□□□□ -0.94
CDH13-203ENST00000431540 XYLBO75191 536 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 TADA2AO75478 443 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 S1PR4O95977 384 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 WEE2P0C1S8 567 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 F5P12259 2224 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 CPA1P15085 419 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 ARF4P18085 180 aaPredicted RBP9.18□□□□□ -0.94
CDH13-203ENST00000431540 SP100P23497 879 aaPredicted RBP9.18□□□□□ -0.94
CDH13-203ENST00000431540 RPS9P46781 194 aaKnown RBP9.18□□□□□ -0.94
CDH13-203ENST00000431540 ANAPC15P60006 121 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 MBTD1Q05BQ5 628 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 HTR4Q13639 388 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 AMHR2Q16671 573 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 FUT10Q6P4F1 479 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 DCLRE1AQ6PJP8 1040 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 BLOC1S3Q6QNY0 202 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 RUBCNQ92622 972 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 TMEM143Q96AN5 459 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 FZD8Q9H461 694 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 NCOA5Q9HCD5 579 aaKnown RBP9.18□□□□□ -0.94
CDH13-203ENST00000431540 GDE1Q9NZC3 331 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 CDH22Q9UJ99 828 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 CDH7Q9ULB5 785 aa9.18□□□□□ -0.94
CDH13-203ENST00000431540 CEP250Q9BV73 2442 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 MYH11P35749 1972 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 FRYLO94915 3013 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 KANSL1LA0AUZ9 987 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 TMEM150BA6NC51 233 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 INO80B-WBP1J3KQ70 363 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 N4BP3O15049 544 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 SLC37A4O43826 429 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 B4GALT3O60512 393 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 PFKFB2O60825 505 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 THP07101 528 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 RFX1P22670 979 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 FSHRP23945 695 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 RARRES1P49788 294 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 SMCPP49901 116 aaPredicted RBP9.17□□□□□ -0.94
CDH13-203ENST00000431540 AFF1P51825 1210 aaKnown RBP9.17□□□□□ -0.94
CDH13-203ENST00000431540 EFNA5P52803 228 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 RAB33AQ14088 237 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms