RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 CLEC4DQ8WXI8 215 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 IL17RAQ96F46 866 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 CIB2O75838 187 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 TMEM119Q4V9L6 283 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 MKNK1Q9BUB5 465 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 NHEJ1Q9H9Q4 299 aaPredicted RBP13.79□□□□□ -0.2
PTCH1-207ENST00000429896 RNF186Q9NXI6 227 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 DPP3Q9NY33 737 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 GOLGA6CA6NDK9 693 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 GOLGA6BA6NDN3 693 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 EVI5O60447 810 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 MMP3P08254 477 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 GOLGA6DP0CG33 693 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 ADAT2Q7Z6V5 191 aaKnown RBP13.79□□□□□ -0.2
PTCH1-207ENST00000429896 AGPAT3Q9NRZ7 376 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 GOLGA6AQ9NYA3 693 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 NKIRAS1Q9NYS0 192 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 ASIC3Q9UHC3 531 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 UTP11Q9Y3A2 253 aaKnown RBP13.79□□□□□ -0.2
PTCH1-207ENST00000429896 DAAM1Q9Y4D1 1078 aa13.79□□□□□ -0.2
PTCH1-207ENST00000429896 FARP2O94887 1054 aaPredicted RBP13.78□□□□□ -0.2
PTCH1-207ENST00000429896 ITGB5P18084 799 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 FUT2Q10981 343 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.78□□□□□ -0.2
PTCH1-207ENST00000429896 SEPT4O43236 478 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 DUSP11O75319 330 aaKnown RBP13.78□□□□□ -0.2
PTCH1-207ENST00000429896 MAPTP10636 758 aaKnown RBP13.78□□□□□ -0.2
PTCH1-207ENST00000429896 IKBKEQ14164 716 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 MTHFD1LQ6UB35 978 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 STMN2Q93045 179 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 KIF9Q9HAQ2 790 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 PPP2R2CQ9Y2T4 447 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 MRPS6P82932 125 aaKnown RBP13.78□□□□□ -0.2
PTCH1-207ENST00000429896 DRAP1Q14919 205 aaPredicted RBP13.78□□□□□ -0.2
PTCH1-207ENST00000429896 FAM76AQ8TAV0 307 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 RSAD2Q8WXG1 361 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 SCN7AQ01118 1682 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 PRPSAP2O60256 369 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 RFX6Q8HWS3 928 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 PASD1Q8IV76 773 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 LRRC8AQ8IWT6 810 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 DCLK2Q8N568 766 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 ARHGEF2Q92974 986 aaKnown RBP13.78□□□□□ -0.2
PTCH1-207ENST00000429896 INPP4AQ96PE3 977 aaPredicted RBP13.78□□□□□ -0.2
PTCH1-207ENST00000429896 SRRDQ9UH36 339 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 STRIP2Q9ULQ0 834 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 SNED1Q8TER0 1413 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 CALB1P05937 261 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 ODC1P11926 461 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 GARTP22102 1010 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 ARL4AP40617 200 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 TMEM8AQ9HCN3 771 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 KBTBD4Q9NVX7 518 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 KANSL3Q9P2N6 904 aa13.78□□□□□ -0.2
PTCH1-207ENST00000429896 TMEM150BA6NC51 233 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 SOWAHBA6NEL2 793 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 TBKBP1A7MCY6 615 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 H7C4K7 107 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 FMO5P49326 533 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 JAG1P78504 1218 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 NBPF20Q3BBV1 942 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 MCF2P10911 925 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 CFAP221Q4G0U5 840 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 GLRA4Q5JXX5 417 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 KIAA1755Q5JYT7 1200 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 BBS5Q8N3I7 341 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 SPIRE2Q8WWL2 714 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 PNMA5Q96PV4 448 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 ADAM22Q9P0K1 906 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 ZNF214Q9UL59 606 aaPredicted RBP13.77□□□□□ -0.2
PTCH1-207ENST00000429896 PCDHB12Q9Y5F1 795 aa13.77□□□□□ -0.2
PTCH1-207ENST00000429896 ATP9AO75110 1047 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 FOXD4Q12950 439 aaPredicted RBP13.77□□□□□ -0.21
PTCH1-207ENST00000429896 CEP128Q6ZU80 1094 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 GSDMBQ8TAX9 411 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 CPSF3Q9UKF6 684 aaKnown RBP13.77□□□□□ -0.21
PTCH1-207ENST00000429896 PRRG1O14668 218 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 ZC3H11AO75152 810 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTCH1-207ENST00000429896 FGFR4P22455 802 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 PCSK1P29120 753 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 SEZ6Q53EL9 994 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 ZNF720Q7Z2F6 126 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 CCDC105Q8IYK2 499 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 PDE11AQ9HCR9 933 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 ENTPD7Q9NQZ7 604 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 CSDE1O75534 798 aaKnown RBP13.77□□□□□ -0.21
PTCH1-207ENST00000429896 ZNF18P17022 549 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 STILQ15468 1287 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 LDLRAD1Q5T700 205 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 SLC27A1Q6PCB7 646 aa13.77□□□□□ -0.21
PTCH1-207ENST00000429896 TXNDC9O14530 226 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 KCNK3O14649 394 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 FRMPD4Q14CM0 1322 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 COL2A1P02458 1487 aaPredicted RBP13.76□□□□□ -0.21
PTCH1-207ENST00000429896 LRRC53A6NM62 1247 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 RALAP11233 206 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 ALDH3A1P30838 453 aa13.76□□□□□ -0.21
PTCH1-207ENST00000429896 SDCCAG8Q86SQ7 713 aaPredicted RBP13.76□□□□□ -0.21
PTCH1-207ENST00000429896 DHX40Q8IX18 779 aaKnown RBP13.76□□□□□ -0.21
PTCH1-207ENST00000429896 GPR161Q8N6U8 529 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms