RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 ATP4AP20648 1035 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 MUTP22033 750 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 LMNB2Q03252 620 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 ZNF618Q5T7W0 954 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 LRRC57Q8N9N7 239 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 CRACR2AQ9BSW2 395 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 LRRC1Q9BTT6 524 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 ZSWIM4Q9H7M6 989 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 DMGDHQ9UI17 866 aaKnown RBP10.36□□□□□ -0.75
NEDD1-203ENST00000429527 SALL4Q9UJQ4 1053 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 TELO2Q9Y4R8 837 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 CENPFP49454 3210 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 EPHB6O15197 1021 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 PSAPP07602 524 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 TRIM21P19474 475 aaKnown RBP10.36□□□□□ -0.75
NEDD1-203ENST00000429527 WDR5P61964 334 aaKnown RBP10.36□□□□□ -0.75
NEDD1-203ENST00000429527 SPA17Q15506 151 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 TCTN1Q2MV58 587 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 B4GALNT4Q76KP1 1039 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 TSEN2Q8NCE0 465 aaKnown RBP10.36□□□□□ -0.75
NEDD1-203ENST00000429527 CYP2W1Q8TAV3 490 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 P3H4Q92791 437 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 CCDC42Q96M95 316 aa10.36□□□□□ -0.75
NEDD1-203ENST00000429527 GTPBP10A4D1E9 387 aaKnown RBP10.35□□□□□ -0.75
NEDD1-203ENST00000429527 WDR64B1ANS9 1081 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 ENC1O14682 589 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 SRGAP2O75044 1071 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 CUL1Q13616 776 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 SLC18A3Q16572 532 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 IFT20Q8IY31 132 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 NEK9Q8TD19 979 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 ATP6V0A1Q93050 837 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 TRAIPQ9BWF2 469 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 PBX4Q9BYU1 374 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 KCTD10Q9H3F6 313 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 RNF216Q9NWF9 866 aaPredicted RBP10.35□□□□□ -0.75
NEDD1-203ENST00000429527 PCDHA10Q9Y5I2 948 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 IPO7O95373 1038 aaKnown RBP10.35□□□□□ -0.75
NEDD1-203ENST00000429527 C22orf31O95567 290 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 KLK7P49862 253 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 STAT5BP51692 787 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 HADHBP55084 474 aaKnown RBP10.35□□□□□ -0.75
NEDD1-203ENST00000429527 CDC42EP1Q00587 391 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 SPIRE1Q08AE8 756 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 PAK2Q13177 524 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 COL19A1Q14993 1142 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 MTHFD1LQ6UB35 978 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 EPM2AIP1Q7L775 607 aaPredicted RBP10.35□□□□□ -0.75
NEDD1-203ENST00000429527 CENPTQ96BT3 561 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 NOX5Q96PH1 765 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 ZNF577Q9BSK1 485 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 ISCUQ9H1K1 167 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 EPN3Q9H201 632 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 DUSP10Q9Y6W6 482 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 MYMKA6NI61 221 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 RSPH10B2B2RC85 870 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 ZNF185O15231 689 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 MAGEB2O15479 319 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 TREHO43280 583 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 RSPH10BP0C881 870 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 EIF4A3P38919 411 aaKnown RBP10.35□□□□□ -0.75
NEDD1-203ENST00000429527 MRPS6P82932 125 aaKnown RBP10.35□□□□□ -0.75
NEDD1-203ENST00000429527 C2orf54Q08AI8 447 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 CFAP221Q4G0U5 840 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 ODR4Q5SWX8 454 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 AGBL2Q5U5Z8 902 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 HERC6Q8IVU3 1022 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 KCNN1Q92952 543 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 PPP1R12CQ9BZL4 782 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 USP20Q9Y2K6 914 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 BZW2Q9Y6E2 419 aaKnown RBP10.35□□□□□ -0.75
NEDD1-203ENST00000429527 SLC4A7Q9Y6M7 1214 aa10.35□□□□□ -0.75
NEDD1-203ENST00000429527 ZNF233A6NK53 670 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 C5orf67F2Z3F1 127 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 CHRNA1P02708 482 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 JAM2P57087 298 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 LACTB2Q53H82 288 aaPredicted RBP10.34□□□□□ -0.75
NEDD1-203ENST00000429527 TSHZ1Q6ZSZ6 1077 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 RSPH3Q86UC2 560 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 EXOC8Q8IYI6 725 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 TBCKQ8TEA7 893 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 TIFAQ96CG3 184 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 PBKQ96KB5 322 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 SYT11Q9BT88 431 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 TEKT3Q9BXF9 490 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 FTHL17Q9BXU8 183 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 ZNF302Q9NR11 478 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 SLC12A6Q9UHW9 1150 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 TRAF3IP3Q9Y228 551 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 TRPV2Q9Y5S1 764 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 STK24Q9Y6E0 443 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 NCANO14594 1321 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 PP2D1A8MPX8 630 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 DNAJB2P25686 324 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 POU5F1Q01860 360 aaKnown RBP10.34□□□□□ -0.75
NEDD1-203ENST00000429527 FBXO47Q5MNV8 452 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 SV2BQ7L1I2 683 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 CCDC60Q8IWA6 550 aaPredicted RBP10.34□□□□□ -0.75
NEDD1-203ENST00000429527 CCDC82Q8N4S0 544 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 LARP4BQ92615 738 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms