RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 FAM20CQ8IXL6 584 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 PTCD2Q8WV60 388 aaKnown RBP9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 MED30Q96HR3 178 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 PYM1Q9BRP8 204 aaKnown RBP9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 TBC1D23Q9NUY8 699 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 FKBP14Q9NWM8 211 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 CRNNQ9UBG3 495 aaPredicted RBP9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 TRAF3IP3Q9Y228 551 aa9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.42□□□□□ -0.9
CDC42BPA-206ENST00000429440 HGSO14964 777 aaPredicted RBP9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 PHF2O75151 1096 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 ZPR1O75312 459 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 CBX6O95503 412 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 FTCDO95954 541 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 KRT4P19013 534 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 PCSK6P29122 969 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 STX2P32856 288 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 PHKA2P46019 1235 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 GSSP48637 474 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 HSD17B4P51659 736 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 POU5F1Q01860 360 aaKnown RBP9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 KCNC4Q03721 635 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 WASHC5Q12768 1159 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 STRN3Q13033 797 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 PPP2R5CQ13362 524 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 NONOQ15233 471 aaKnown RBP eCLIP9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 UGT2A3Q6UWM9 527 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 CAPN12Q6ZSI9 719 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 ANO5Q75V66 913 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 CHST3Q7LGC8 479 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 NET1Q7Z628 596 aaPredicted RBP9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 PDSS2Q86YH6 399 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 ZSCAN29Q8IWY8 852 aaPredicted RBP9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 CCDC82Q8N4S0 544 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 ANKRD13CQ8N6S4 541 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 OR7G1Q8NGA0 311 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 TUBGCP2Q9BSJ2 902 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 OSBPL6Q9BZF3 934 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 NT5C3AQ9H0P0 336 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 EBF3Q9H4W6 596 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 NDE1Q9NXR1 346 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 C6orf203Q9P0P8 240 aaPredicted RBP9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 AMACRQ9UHK6 382 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 GTF3C4Q9UKN8 822 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 ANGEL1Q9UNK9 670 aaKnown RBP9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 NHSL1Q5SYE7 1610 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 A0A087X0B3 334 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 KCNK3O14649 394 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 GTPBP6O43824 516 aaPredicted RBP9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 CDH3P22223 829 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 HMOX2P30519 316 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 RAP1GDS1P52306 607 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 RNASE9P60153 205 aaKnown RBP9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 NADK2Q4G0N4 442 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 KAZNQ674X7 775 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 PPP1R21Q6ZMI0 780 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 DCDC5Q6ZRR9 648 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 TOM1L2Q6ZVM7 507 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 ADSSL1Q8N142 457 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 RASGEF1CQ8N431 466 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 OR6Y1Q8NGX8 325 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 ZNF398Q8TD17 642 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 ACMSDQ8TDX5 336 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 DDI1Q8WTU0 396 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 SNF8Q96H20 258 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 GPATCH1Q9BRR8 931 aaKnown RBP9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 C2orf49Q9BVC5 232 aaPredicted RBP9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 LRRC27Q9C0I9 530 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 CCDC113Q9H0I3 377 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 WASF2Q9Y6W5 498 aa9.41□□□□□ -0.9
CDC42BPA-206ENST00000429440 CCDC160A6NGH7 325 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 BTNL10A8MVZ5 291 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 KRIT1O00522 736 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 PFDN6O15212 129 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 OCM2P0CE71 109 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 OCMP0CE72 109 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 ITGA6P23229 1130 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 TUFMP49411 452 aaKnown RBP9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 AP2B1P63010 937 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 KLRC3Q07444 240 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 PDAP1Q13442 181 aaKnown RBP9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 PHKG1Q16816 387 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 DUPD1Q68J44 220 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 RGS9BPQ6ZS82 235 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 ITIH5Q86UX2 942 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 MGARPQ8TDB4 240 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 ANKS1AQ92625 1134 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 RUNDC3BQ96NL0 473 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 AIFM3Q96NN9 605 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 SERPINB12Q96P63 405 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 MRPS26Q9BYN8 205 aaKnown RBP9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 EDEM3Q9BZQ6 932 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 SENP6Q9GZR1 1112 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 FOXP1Q9H334 677 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 SLAIN2Q9P270 581 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 KLHL3Q9UH77 587 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 DOLKQ9UPQ8 538 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 DDX60Q8IY21 1712 aaKnown RBP9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 MYH6P13533 1939 aa9.4□□□□□ -0.9
CDC42BPA-206ENST00000429440 ZNF335Q9H4Z2 1342 aaPredicted RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms