RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 GJB6O95452 261 aa8.61□□□□□ -1.03
HPS4-205ENST00000429411 ACOT2P49753 483 aa8.61□□□□□ -1.03
HPS4-205ENST00000429411 LIG4P49917 911 aa8.61□□□□□ -1.03
HPS4-205ENST00000429411 RASA3Q14644 834 aa8.61□□□□□ -1.03
HPS4-205ENST00000429411 CHADLQ6NUI6 762 aa8.61□□□□□ -1.03
HPS4-205ENST00000429411 C1orf186Q6ZWK4 172 aa8.61□□□□□ -1.03
HPS4-205ENST00000429411 EEPD1Q7L9B9 569 aa8.61□□□□□ -1.03
HPS4-205ENST00000429411 ZDHHC15Q96MV8 337 aa8.61□□□□□ -1.03
HPS4-205ENST00000429411 POLR3CQ9BUI4 534 aaPredicted RBP8.61□□□□□ -1.03
HPS4-205ENST00000429411 SYNCQ9H7C4 482 aa8.61□□□□□ -1.03
HPS4-205ENST00000429411 TMEM206Q9H813 350 aa8.61□□□□□ -1.03
HPS4-205ENST00000429411 TUFT1Q9NNX1 390 aa8.61□□□□□ -1.03
HPS4-205ENST00000429411 SIX2Q9NPC8 291 aa8.61□□□□□ -1.03
HPS4-205ENST00000429411 ODF2LQ9ULJ1 636 aa8.61□□□□□ -1.03
HPS4-205ENST00000429411 ZHX2Q9Y6X8 837 aa8.61□□□□□ -1.03
HPS4-205ENST00000429411 KIF3CO14782 793 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 PIAS1O75925 651 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 CD19P15391 556 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 YWHABP31946 246 aaKnown RBP8.6□□□□□ -1.03
HPS4-205ENST00000429411 QARSP47897 775 aaKnown RBP8.6□□□□□ -1.03
HPS4-205ENST00000429411 EIF3BP55884 814 aaKnown RBP8.6□□□□□ -1.03
HPS4-205ENST00000429411 OSTNP61366 133 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 SNRNP35Q16560 246 aaKnown RBP8.6□□□□□ -1.03
HPS4-205ENST00000429411 Q4G0T1 1027 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 RSBN1LQ6PCB5 846 aaPredicted RBP8.6□□□□□ -1.03
HPS4-205ENST00000429411 LRIG3Q6UXM1 1119 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 LENG9Q96B70 501 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 KLHL29Q96CT2 875 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 RMDN3Q96TC7 470 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 TMEM117Q9H0C3 514 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 CARD9Q9H257 536 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 PABPC3Q9H361 631 aaKnown RBP8.6□□□□□ -1.03
HPS4-205ENST00000429411 MYOZ2Q9NPC6 264 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 PARP2Q9UGN5 583 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 VAV3Q9UKW4 847 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 PCDHB4Q9Y5E5 795 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 A0A1B0GUL6 1792 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 IGKV6D-41A0A0C4DH26 115 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 KIF1CO43896 1103 aaKnown RBP8.6□□□□□ -1.03
HPS4-205ENST00000429411 PHF2O75151 1096 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 BRAFP15056 766 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 CHRNA3P32297 505 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 PIK3CAP42336 1068 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 ERFP50548 548 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 SPIRE1Q08AE8 756 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 FAM182AQ5T1J6 154 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 SCARA5Q6ZMJ2 495 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 USP37Q86T82 979 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 IL31RAQ8NI17 732 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 TAS1R2Q8TE23 839 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 N4BP2L2Q92802 583 aaPredicted RBP8.6□□□□□ -1.03
HPS4-205ENST00000429411 ZSWIM1Q9BR11 485 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 TRIM7Q9C029 511 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 OLFML3Q9NRN5 406 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 EXOC7Q9UPT5 735 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 KLRG2A4D1S0 409 aaPredicted RBP8.6□□□□□ -1.03
HPS4-205ENST00000429411 P4HBP07237 508 aaKnown RBP8.6□□□□□ -1.03
HPS4-205ENST00000429411 PRKCIP41743 596 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 PTENP60484 403 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 PPP2R5EQ16537 467 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 HYIQ5T013 277 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 C6orf118Q5T5N4 469 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 UBAP2Q5T6F2 1119 aaKnown RBP8.6□□□□□ -1.03
HPS4-205ENST00000429411 STRIP1Q5VSL9 837 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 SPOPLQ6IQ16 392 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 TMEM270Q6UE05 265 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 ANKRD23Q86SG2 305 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 NOP9Q86U38 636 aaKnown RBP8.6□□□□□ -1.03
HPS4-205ENST00000429411 ATP8B4Q8TF62 1192 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 TATDN2Q93075 761 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 IFT74Q96LB3 600 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 HSD17B14Q9BPX1 270 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 AGTPBP1Q9UPW5 1226 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 NUB1Q9Y5A7 615 aa8.6□□□□□ -1.03
HPS4-205ENST00000429411 BCORQ6W2J9 1755 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 MIF4GDA9UHW6 222 aaKnown RBP8.59□□□□□ -1.03
HPS4-205ENST00000429411 ADCY2Q08462 1091 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 BYSLQ13895 437 aaKnown RBP8.59□□□□□ -1.03
HPS4-205ENST00000429411 RRP1BQ14684 758 aaKnown RBP8.59□□□□□ -1.03
HPS4-205ENST00000429411 DCAF12L1Q5VU92 463 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 ZNF449Q6P9G9 518 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 FMNL3Q8IVF7 1028 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 PARP9Q8IXQ6 854 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 SMC1BQ8NDV3 1235 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 HES6Q96HZ4 224 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 IMPG2Q9BZV3 1241 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 CNOT10Q9H9A5 744 aaKnown RBP8.59□□□□□ -1.03
HPS4-205ENST00000429411 ADARB2Q9NS39 739 aaKnown RBP8.59□□□□□ -1.03
HPS4-205ENST00000429411 DIS3Q9Y2L1 958 aaKnown RBP8.59□□□□□ -1.03
HPS4-205ENST00000429411 DOCK2Q92608 1830 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 TMEM120BA0PK00 339 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 ANKRD63C9JTQ0 380 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 PODXLO00592 558 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 CHUKO15111 745 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 TRAPPC3O43617 180 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 RTN2O75298 545 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 KRT19P08727 400 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 RARAP10276 462 aa8.59□□□□□ -1.03
HPS4-205ENST00000429411 MARSP56192 900 aaKnown RBP8.59□□□□□ -1.03
HPS4-205ENST00000429411 STRN3Q13033 797 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms