RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 FOXD2O60548 495 aaPredicted RBP12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 PSMD10O75832 226 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 KCNK5O95279 499 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 RHOP08100 348 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 HOXC13P31276 330 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 LIMK1P53667 647 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 GRIK3Q13003 919 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 NOTUMQ6P988 496 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 CDR2LQ86X02 465 aaPredicted RBP12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 RDM1Q8NG50 284 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 LNX1Q8TBB1 728 aaPredicted RBP12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 PSPC1Q8WXF1 523 aaKnown RBP12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 SLC7A3Q8WY07 619 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 PIK3R5Q8WYR1 880 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 ELSPBP1Q96BH3 223 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 IER2Q9BTL4 223 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 TRIM6Q9C030 488 aaPredicted RBP12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 CSRNP2Q9H175 543 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 SMOC1Q9H4F8 434 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 RBM12Q9NTZ6 932 aaKnown RBP12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 GIT1Q9Y2X7 761 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 PIAS3Q9Y6X2 628 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 LOC400499M0QZD8 3231 aa12.94□□□□□ -0.34
ALMS1P1-201ENST00000428767 KLF18A0A0U1RQI7 1052 aa12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 NRG2O14511 850 aaPredicted RBP12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 KIF4AO95239 1232 aa12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 NPTXRO95502 500 aa12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 SPINK2P20155 84 aa12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 FCARP24071 287 aa12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 GDI1P31150 447 aa12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 OR1D2P34982 312 aa12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 STPG1Q5TH74 334 aa12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 CREB3L3Q68CJ9 461 aa12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 PSAPL1Q6NUJ1 521 aa12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 LONP2Q86WA8 852 aa12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 GSTCDQ8NEC7 633 aa12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 CCDC12Q8WUD4 166 aaPredicted RBP12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 GDE1Q9NZC3 331 aa12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 PARP2Q9UGN5 583 aa12.93□□□□□ -0.34
ALMS1P1-201ENST00000428767 INO80B-WBP1J3KQ70 363 aa12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 K7ESF4 209 aa12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 POU2F2P09086 479 aa12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 CCNE1P24864 410 aa12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 FOXC1Q12948 553 aa12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 EMC2Q15006 297 aa12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 MAMSTRQ6ZN01 415 aa12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 Q6ZS52 159 aa12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 SKAP1Q86WV1 359 aa12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 HACE1Q8IYU2 909 aa12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 TCEAL4Q96EI5 215 aa12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 CEP170P1Q96L14 293 aa12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 TRMT61BQ9BVS5 477 aaKnown RBP12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 ZNF334Q9HCZ1 680 aaPredicted RBP12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 C2orf42Q9NWW7 574 aa12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 GCN1Q92616 2671 aaKnown RBP12.92□□□□□ -0.34
ALMS1P1-201ENST00000428767 TDP2O95551 362 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 CHRNB1P11230 501 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 GNA11P29992 359 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 AXLP30530 894 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 CNR2P34972 360 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 ADD1P35611 737 aaKnown RBP12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 PSMC5P62195 406 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 TUSC3Q13454 348 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 FAM78AQ5JUQ0 283 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 B3GNT9Q6UX72 402 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 VITQ6UXI7 678 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 FERMT3Q86UX7 667 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 SPEM1Q8N4L4 309 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 IRF7Q92985 503 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 COL26A1Q96A83 441 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 CCDC51Q96ER9 411 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 LSG1Q9H089 658 aaKnown RBP12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 DHX33Q9H6R0 707 aaKnown RBP12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 ZFP14Q9HCL3 533 aa12.91□□□□□ -0.34
ALMS1P1-201ENST00000428767 NUP205Q92621 2012 aa12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 SOBPA7XYQ1 873 aa12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 EML1O00423 815 aa12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 GIPC1O14908 333 aa12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 B4GALT5O43286 388 aa12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 ARF4P18085 180 aaPredicted RBP12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 NOVA1P51513 510 aaKnown RBP12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 PTGDRQ13258 359 aa12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 RAB33AQ14088 237 aa12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 UVSSAQ2YD98 709 aa12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 KDF1Q8NAX2 398 aaPredicted RBP12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 BICD2Q8TD16 824 aa12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 TBCKQ8TEA7 893 aa12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 CORO1BQ9BR76 489 aa12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 LSM14BQ9BX40 385 aaKnown RBP12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 WRAP73Q9P2S5 460 aaPredicted RBP12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 LHX6Q9UPM6 363 aa12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 CDY1Q9Y6F8 540 aa12.9□□□□□ -0.34
ALMS1P1-201ENST00000428767 NCANO14594 1321 aa12.89□□□□□ -0.35
ALMS1P1-201ENST00000428767 SRRM3A6NNA2 597 aaPredicted RBP12.89□□□□□ -0.35
ALMS1P1-201ENST00000428767 EPN2O95208 641 aa12.89□□□□□ -0.35
ALMS1P1-201ENST00000428767 TOP3BO95985 862 aaKnown RBP12.89□□□□□ -0.35
ALMS1P1-201ENST00000428767 LRG1P02750 347 aa12.89□□□□□ -0.35
ALMS1P1-201ENST00000428767 ZNF806P0C7X5 589 aa12.89□□□□□ -0.35
ALMS1P1-201ENST00000428767 PTPN2P17706 415 aa12.89□□□□□ -0.35
ALMS1P1-201ENST00000428767 RFC5P40937 340 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms