RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 CXCL16Q9H2A7 254 aa27.44■■□□□ 1.98
HERPUD2-205ENST00000427455 PUF60Q9UHX1 559 aaKnown RBP27.44■■□□□ 1.98
HERPUD2-205ENST00000427455 RPN1P04843 607 aaKnown RBP27.43■■□□□ 1.98
HERPUD2-205ENST00000427455 ALDH2P05091 517 aa27.43■■□□□ 1.98
HERPUD2-205ENST00000427455 OR1G1P47890 313 aa27.43■■□□□ 1.98
HERPUD2-205ENST00000427455 TUSC3Q13454 348 aa27.43■■□□□ 1.98
HERPUD2-205ENST00000427455 CAMK1Q14012 370 aa27.43■■□□□ 1.98
HERPUD2-205ENST00000427455 GLRA4Q5JXX5 417 aa27.43■■□□□ 1.98
HERPUD2-205ENST00000427455 ZNF507Q8TCN5 953 aa27.43■■□□□ 1.98
HERPUD2-205ENST00000427455 POMGNT1Q8WZA1 660 aa27.43■■□□□ 1.98
HERPUD2-205ENST00000427455 CCDC47Q96A33 483 aaKnown RBP27.43■■□□□ 1.98
HERPUD2-205ENST00000427455 TIGD1Q96MW7 591 aa27.43■■□□□ 1.98
HERPUD2-205ENST00000427455 SLC39A2Q9NP94 309 aa27.43■■□□□ 1.98
HERPUD2-205ENST00000427455 CNTN3Q9P232 1028 aa27.43■■□□□ 1.98
HERPUD2-205ENST00000427455 FAN1Q9Y2M0 1017 aa27.43■■□□□ 1.98
HERPUD2-205ENST00000427455 NRP1O14786 923 aa27.42■■□□□ 1.98
HERPUD2-205ENST00000427455 CXCL8P10145 99 aa27.42■■□□□ 1.98
HERPUD2-205ENST00000427455 ADSSP30520 456 aa27.42■■□□□ 1.98
HERPUD2-205ENST00000427455 PSMD2Q13200 908 aa27.42■■□□□ 1.98
HERPUD2-205ENST00000427455 NAB2Q15742 525 aa27.42■■□□□ 1.98
HERPUD2-205ENST00000427455 SCFD1Q8WVM8 642 aa27.42■■□□□ 1.98
HERPUD2-205ENST00000427455 PPP1R10Q96QC0 940 aaKnown RBP27.42■■□□□ 1.98
HERPUD2-205ENST00000427455 TLR9Q9NR96 1032 aa27.42■■□□□ 1.98
HERPUD2-205ENST00000427455 AGO2Q9UKV8 859 aaKnown RBP27.42■■□□□ 1.98
HERPUD2-205ENST00000427455 PRG3Q9Y2Y8 225 aaPredicted RBP27.42■■□□□ 1.98
HERPUD2-205ENST00000427455 TRIP11Q15643 1979 aa27.42■■□□□ 1.98
HERPUD2-205ENST00000427455 SMIM28A0A1B0GU29 152 aa27.41■■□□□ 1.98
HERPUD2-205ENST00000427455 MEFVO15553 781 aaPredicted RBP27.41■■□□□ 1.98
HERPUD2-205ENST00000427455 CSPG5O95196 566 aa27.41■■□□□ 1.98
HERPUD2-205ENST00000427455 KCNE1P15382 129 aa27.41■■□□□ 1.98
HERPUD2-205ENST00000427455 TNFSF9P41273 254 aa27.41■■□□□ 1.98
HERPUD2-205ENST00000427455 UBE2HP62256 183 aa27.41■■□□□ 1.98
HERPUD2-205ENST00000427455 BMT2Q1RMZ1 405 aa27.41■■□□□ 1.98
HERPUD2-205ENST00000427455 SLC10A6Q3KNW5 377 aa27.41■■□□□ 1.98
HERPUD2-205ENST00000427455 ZBTB41Q5SVQ8 909 aa27.41■■□□□ 1.98
HERPUD2-205ENST00000427455 CLEC17AQ6ZS10 378 aa27.41■■□□□ 1.98
HERPUD2-205ENST00000427455 BCL7CQ8WUZ0 217 aaPredicted RBP27.41■■□□□ 1.98
HERPUD2-205ENST00000427455 PLEKHA5Q9HAU0 1116 aa27.41■■□□□ 1.98
HERPUD2-205ENST00000427455 PDCD11Q14690 1871 aaKnown RBP27.4■■□□□ 1.98
HERPUD2-205ENST00000427455 KINO60870 393 aaKnown RBP27.4■■□□□ 1.98
HERPUD2-205ENST00000427455 GARTP22102 1010 aa27.4■■□□□ 1.98
HERPUD2-205ENST00000427455 HOXD13P35453 343 aa27.4■■□□□ 1.98
HERPUD2-205ENST00000427455 PPP2R3AQ06190 1150 aa27.4■■□□□ 1.98
HERPUD2-205ENST00000427455 KIAA0895Q8NCT3 520 aa27.4■■□□□ 1.98
HERPUD2-205ENST00000427455 NSUN3Q9H649 340 aaKnown RBP27.4■■□□□ 1.98
HERPUD2-205ENST00000427455 RPF1Q9H9Y2 349 aaKnown RBP27.4■■□□□ 1.98
HERPUD2-205ENST00000427455 SLC38A7Q9NVC3 462 aa27.4■■□□□ 1.98
HERPUD2-205ENST00000427455 MARCH5Q9NX47 278 aa27.4■■□□□ 1.98
HERPUD2-205ENST00000427455 STK39Q9UEW8 545 aa27.4■■□□□ 1.98
HERPUD2-205ENST00000427455 HOOK1Q9UJC3 728 aaKnown RBP27.4■■□□□ 1.98
HERPUD2-205ENST00000427455 CPSF3Q9UKF6 684 aaKnown RBP27.4■■□□□ 1.98
HERPUD2-205ENST00000427455 TTC26A0AVF1 554 aa27.39■■□□□ 1.98
HERPUD2-205ENST00000427455 CASTOR2A6NHX0 329 aa27.39■■□□□ 1.98
HERPUD2-205ENST00000427455 RHOBTB3O94955 611 aa27.39■■□□□ 1.98
HERPUD2-205ENST00000427455 STK4Q13043 487 aa27.39■■□□□ 1.98
HERPUD2-205ENST00000427455 CCDC85BQ15834 202 aaPredicted RBP27.39■■□□□ 1.98
HERPUD2-205ENST00000427455 ENOX2Q16206 610 aaKnown RBP27.39■■□□□ 1.98
HERPUD2-205ENST00000427455 PDE12Q6L8Q7 609 aaKnown RBP27.39■■□□□ 1.98
HERPUD2-205ENST00000427455 DDX53Q86TM3 631 aaKnown RBP27.39■■□□□ 1.98
HERPUD2-205ENST00000427455 PPM1EQ8WY54 764 aa27.39■■□□□ 1.98
HERPUD2-205ENST00000427455 ZMAT2Q96NC0 199 aaKnown RBP27.39■■□□□ 1.98
HERPUD2-205ENST00000427455 IRS1P35568 1242 aa27.38■■□□□ 1.97
HERPUD2-205ENST00000427455 ACOT2P49753 483 aa27.38■■□□□ 1.97
HERPUD2-205ENST00000427455 PNOCQ13519 176 aa27.38■■□□□ 1.97
HERPUD2-205ENST00000427455 KCNB1Q14721 858 aa27.38■■□□□ 1.97
HERPUD2-205ENST00000427455 ARMCX5Q6P1M9 558 aa27.38■■□□□ 1.97
HERPUD2-205ENST00000427455 TCF25Q9BQ70 676 aa27.38■■□□□ 1.97
HERPUD2-205ENST00000427455 COLEC11Q9BWP8 271 aa27.38■■□□□ 1.97
HERPUD2-205ENST00000427455 ENTPD7Q9NQZ7 604 aa27.38■■□□□ 1.97
HERPUD2-205ENST00000427455 REV3LO60673 3130 aa27.38■■□□□ 1.97
HERPUD2-205ENST00000427455 FSCN2O14926 492 aa27.37■■□□□ 1.97
HERPUD2-205ENST00000427455 KIAA0391O15091 583 aaKnown RBP27.37■■□□□ 1.97
HERPUD2-205ENST00000427455 PRPF40AO75400 957 aaKnown RBP27.37■■□□□ 1.97
HERPUD2-205ENST00000427455 ADRB2P07550 413 aa27.37■■□□□ 1.97
HERPUD2-205ENST00000427455 ERVFC1P60507 584 aa27.37■■□□□ 1.97
HERPUD2-205ENST00000427455 POU5F1Q01860 360 aaKnown RBP27.37■■□□□ 1.97
HERPUD2-205ENST00000427455 HSP90AA2PQ14568 343 aaPredicted RBP27.37■■□□□ 1.97
HERPUD2-205ENST00000427455 NELFCDQ8IXH7 590 aa27.37■■□□□ 1.97
HERPUD2-205ENST00000427455 ELOA2Q8IYF1 753 aaPredicted RBP27.37■■□□□ 1.97
HERPUD2-205ENST00000427455 PPP2R3CQ969Q6 453 aa27.37■■□□□ 1.97
HERPUD2-205ENST00000427455 UROC1Q96N76 676 aa27.37■■□□□ 1.97
HERPUD2-205ENST00000427455 CBWD1Q9BRT8 395 aa27.37■■□□□ 1.97
HERPUD2-205ENST00000427455 MYO7AQ13402 2215 aa27.37■■□□□ 1.97
HERPUD2-205ENST00000427455 LDHAP00338 332 aaKnown RBP27.36■■□□□ 1.97
HERPUD2-205ENST00000427455 SNRPFP62306 86 aaKnown RBP27.36■■□□□ 1.97
HERPUD2-205ENST00000427455 TCEAL5Q5H9L2 206 aa27.36■■□□□ 1.97
HERPUD2-205ENST00000427455 HS2ST1Q7LGA3 356 aa27.36■■□□□ 1.97
HERPUD2-205ENST00000427455 CD302Q8IX05 232 aa27.36■■□□□ 1.97
HERPUD2-205ENST00000427455 MICAL1Q8TDZ2 1067 aa27.36■■□□□ 1.97
HERPUD2-205ENST00000427455 TSPAN18Q96SJ8 248 aa27.36■■□□□ 1.97
HERPUD2-205ENST00000427455 PAAF1Q9BRP4 392 aa27.36■■□□□ 1.97
HERPUD2-205ENST00000427455 VN1R3Q9BXE9 311 aa27.36■■□□□ 1.97
HERPUD2-205ENST00000427455 NGRNQ9NPE2 291 aaKnown RBP27.36■■□□□ 1.97
HERPUD2-205ENST00000427455 CACNG4Q9UBN1 327 aa27.36■■□□□ 1.97
HERPUD2-205ENST00000427455 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.36■■□□□ 1.97
HERPUD2-205ENST00000427455 LACTBL1A8MY62 500 aa27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 F8W810 466 aa27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 TGFB1I1O43294 461 aa27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 KNOP1Q1ED39 458 aaKnown RBP27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 PLPP4Q5VZY2 271 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms