RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 TOPORSQ9NS56 1045 aaPredicted RBP23.47■■□□□ 1.35
RPUSD3-205ENST00000427174 CNTN3Q9P232 1028 aa23.47■■□□□ 1.35
RPUSD3-205ENST00000427174 CPSF3Q9UKF6 684 aaKnown RBP23.47■■□□□ 1.35
RPUSD3-205ENST00000427174 PRUNE2Q8WUY3 3088 aa23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 TTC26A0AVF1 554 aa23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 GRM6O15303 877 aa23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 KCNE1P15382 129 aa23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 SLC11A1P49279 550 aa23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 YARSP54577 528 aaKnown RBP23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 CAMK1Q14012 370 aa23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 CRELD2Q6UXH1 353 aaPredicted RBP23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 TMEM173Q86WV6 379 aaPredicted RBP23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 SYCP3Q8IZU3 236 aa23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 SPPL3Q8TCT6 385 aa23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 ZMAT2Q96NC0 199 aaKnown RBP23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 GSDMAQ96QA5 445 aa23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 GBP3Q9H0R5 595 aa23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 LMCD1Q9NZU5 365 aa23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 AGO2Q9UKV8 859 aaKnown RBP23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 PCDHA5Q9Y5H7 936 aa23.46■■□□□ 1.35
RPUSD3-205ENST00000427174 SMIM28A0A1B0GU29 152 aa23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 CARNS1A5YM72 827 aa23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 FGF18O76093 207 aa23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 THP07101 528 aa23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 CXCL8P10145 99 aa23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 PPM1AP35813 382 aa23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 POU5F1Q01860 360 aaKnown RBP23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 PLCB3Q01970 1234 aa23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 ENOX2Q16206 610 aaKnown RBP23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 ZSWIM2Q8NEG5 633 aa23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 BCL7CQ8WUZ0 217 aaPredicted RBP23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 POMGNT1Q8WZA1 660 aa23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 ERCC4Q92889 916 aaPredicted RBP23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 GAS2L1Q99501 681 aaPredicted RBP23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 CBWD1Q9BRT8 395 aa23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 PLEKHA5Q9HAU0 1116 aa23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 ALG13Q9NP73 1137 aaKnown RBP23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 SPG21Q9NZD8 308 aa23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 MTCH2Q9Y6C9 303 aa23.45■■□□□ 1.34
RPUSD3-205ENST00000427174 VWA8A3KMH1 1905 aa23.44■■□□□ 1.34
RPUSD3-205ENST00000427174 NT5C1B-RDH14C9J2C7 533 aa23.44■■□□□ 1.34
RPUSD3-205ENST00000427174 DNAJB1P25685 340 aa23.44■■□□□ 1.34
RPUSD3-205ENST00000427174 ALDH7A1P49419 539 aaKnown RBP23.44■■□□□ 1.34
RPUSD3-205ENST00000427174 TUSC3Q13454 348 aa23.44■■□□□ 1.34
RPUSD3-205ENST00000427174 KNOP1Q1ED39 458 aaKnown RBP23.44■■□□□ 1.34
RPUSD3-205ENST00000427174 NELFCDQ8IXH7 590 aa23.44■■□□□ 1.34
RPUSD3-205ENST00000427174 CCDC47Q96A33 483 aaKnown RBP23.44■■□□□ 1.34
RPUSD3-205ENST00000427174 FAM193BQ96PV7 902 aaPredicted RBP23.44■■□□□ 1.34
RPUSD3-205ENST00000427174 LMAN2LQ9H0V9 348 aa23.44■■□□□ 1.34
RPUSD3-205ENST00000427174 HOOK1Q9UJC3 728 aaKnown RBP23.44■■□□□ 1.34
RPUSD3-205ENST00000427174 NRP1O14786 923 aa23.43■■□□□ 1.34
RPUSD3-205ENST00000427174 EFEMP2O95967 443 aa23.43■■□□□ 1.34
RPUSD3-205ENST00000427174 ACOT2P49753 483 aa23.43■■□□□ 1.34
RPUSD3-205ENST00000427174 SNRPFP62306 86 aaKnown RBP23.43■■□□□ 1.34
RPUSD3-205ENST00000427174 UBE3AQ05086 875 aa23.43■■□□□ 1.34
RPUSD3-205ENST00000427174 GLRA4Q5JXX5 417 aa23.43■■□□□ 1.34
RPUSD3-205ENST00000427174 IGSF21Q96ID5 467 aa23.43■■□□□ 1.34
RPUSD3-205ENST00000427174 KCTD10Q9H3F6 313 aa23.43■■□□□ 1.34
RPUSD3-205ENST00000427174 AGPAT3Q9NRZ7 376 aa23.43■■□□□ 1.34
RPUSD3-205ENST00000427174 MARCH5Q9NX47 278 aa23.43■■□□□ 1.34
RPUSD3-205ENST00000427174 LZTS1Q9Y250 596 aa23.43■■□□□ 1.34
RPUSD3-205ENST00000427174 STXBP5LQ9Y2K9 1186 aa23.43■■□□□ 1.34
RPUSD3-205ENST00000427174 SMC2O95347 1197 aa23.42■■□□□ 1.34
RPUSD3-205ENST00000427174 ALDH2P05091 517 aa23.42■■□□□ 1.34
RPUSD3-205ENST00000427174 FOSL2P15408 326 aa23.42■■□□□ 1.34
RPUSD3-205ENST00000427174 SOX4Q06945 474 aaPredicted RBP23.42■■□□□ 1.34
RPUSD3-205ENST00000427174 ZBTB6Q15916 424 aa23.42■■□□□ 1.34
RPUSD3-205ENST00000427174 C12orf56Q8IXR9 622 aa23.42■■□□□ 1.34
RPUSD3-205ENST00000427174 TMEM174Q8WUU8 243 aa23.42■■□□□ 1.34
RPUSD3-205ENST00000427174 MRPL38Q96DV4 380 aaKnown RBP23.42■■□□□ 1.34
RPUSD3-205ENST00000427174 PAAF1Q9BRP4 392 aa23.42■■□□□ 1.34
RPUSD3-205ENST00000427174 CGNQ9P2M7 1197 aaKnown RBP23.42■■□□□ 1.34
RPUSD3-205ENST00000427174 FAN1Q9Y2M0 1017 aa23.42■■□□□ 1.34
RPUSD3-205ENST00000427174 LACTBL1A8MY62 500 aa23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 KIAA0391O15091 583 aaKnown RBP23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 COBLL1Q53SF7 1204 aa23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 ARMCX5Q6P1M9 558 aa23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 GUF1Q8N442 669 aaKnown RBP23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 POF1BQ8WVV4 589 aa23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 SMARCE1Q969G3 411 aa23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 SAAL1Q96ER3 474 aa23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 FBXL18Q96ME1 805 aa23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 VN1R3Q9BXE9 311 aa23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 PCIF1Q9H4Z3 704 aa23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 RPF1Q9H9Y2 349 aaKnown RBP23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 RMND1Q9NWS8 449 aa23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 CACNG4Q9UBN1 327 aa23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 SCN1AP35498 2009 aa23.41■■□□□ 1.34
RPUSD3-205ENST00000427174 F8W810 466 aa23.4■■□□□ 1.34
RPUSD3-205ENST00000427174 EXTL3O43909 919 aa23.4■■□□□ 1.34
RPUSD3-205ENST00000427174 LDHAP00338 332 aaKnown RBP23.4■■□□□ 1.34
RPUSD3-205ENST00000427174 ZNF658Q5TYW1 1059 aaPredicted RBP23.4■■□□□ 1.34
RPUSD3-205ENST00000427174 CD302Q8IX05 232 aa23.4■■□□□ 1.34
RPUSD3-205ENST00000427174 TSPAN18Q96SJ8 248 aa23.4■■□□□ 1.34
RPUSD3-205ENST00000427174 HSPBP1Q9NZL4 362 aa23.4■■□□□ 1.34
RPUSD3-205ENST00000427174 PDXKO00764 312 aa23.39■■□□□ 1.33
RPUSD3-205ENST00000427174 FSCN2O14926 492 aa23.39■■□□□ 1.33
RPUSD3-205ENST00000427174 IGFBP4P22692 258 aa23.39■■□□□ 1.33
RPUSD3-205ENST00000427174 OR1G1P47890 313 aa23.39■■□□□ 1.33
RPUSD3-205ENST00000427174 PPP2R3AQ06190 1150 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms