RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 TDP2O95551 362 aa15.77■□□□□ 0.12
HDAC6-206ENST00000426196 AKAP5P24588 427 aa15.77■□□□□ 0.12
HDAC6-206ENST00000426196 CNR2P34972 360 aa15.77■□□□□ 0.12
HDAC6-206ENST00000426196 CXCL12P48061 93 aa15.77■□□□□ 0.12
HDAC6-206ENST00000426196 PTENP60484 403 aa15.77■□□□□ 0.12
HDAC6-206ENST00000426196 FGD1P98174 961 aa15.77■□□□□ 0.12
HDAC6-206ENST00000426196 TUSC3Q13454 348 aa15.77■□□□□ 0.12
HDAC6-206ENST00000426196 MXD4Q14582 209 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-206ENST00000426196 ACAP1Q15027 740 aa15.77■□□□□ 0.12
HDAC6-206ENST00000426196 AASDHQ4L235 1098 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-206ENST00000426196 N4BP2L1Q5TBK1 243 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-206ENST00000426196 TANGO2Q6ICL3 276 aa15.77■□□□□ 0.12
HDAC6-206ENST00000426196 ZNF687Q8N1G0 1237 aa15.77■□□□□ 0.12
HDAC6-206ENST00000426196 ZNF579Q8NAF0 562 aaKnown RBP15.77■□□□□ 0.12
HDAC6-206ENST00000426196 ETNPPLQ8TBG4 499 aa15.77■□□□□ 0.12
HDAC6-206ENST00000426196 ESYT1Q9BSJ8 1104 aa15.77■□□□□ 0.12
HDAC6-206ENST00000426196 LMAN1LQ9HAT1 526 aa15.77■□□□□ 0.12
HDAC6-206ENST00000426196 PARP2Q9UGN5 583 aa15.77■□□□□ 0.12
HDAC6-206ENST00000426196 PDCD11Q14690 1871 aaKnown RBP15.77■□□□□ 0.11
HDAC6-206ENST00000426196 CASTOR2A6NHX0 329 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 ADAM12O43184 909 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 RHOP08100 348 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 LIMK1P53667 647 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 SATB1Q01826 763 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 RAB33AQ14088 237 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 TFDP1Q14186 410 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 GRM2Q14416 872 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 FAM3CQ92520 227 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 IRF7Q92985 503 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 MTRQ99707 1265 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 PAAF1Q9BRP4 392 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 KLK14Q9P0G3 267 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 VPS54Q9P1Q0 977 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 CACNG4Q9UBN1 327 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 COL4A2P08572 1712 aa15.76■□□□□ 0.11
HDAC6-206ENST00000426196 CYP3A7-CYP3A51PA0A087WV96 503 aa15.75■□□□□ 0.11
HDAC6-206ENST00000426196 CHURC1-FNTBB4DL54 471 aa15.75■□□□□ 0.11
HDAC6-206ENST00000426196 HRO43593 1189 aa15.75■□□□□ 0.11
HDAC6-206ENST00000426196 KIF4AO95239 1232 aa15.75■□□□□ 0.11
HDAC6-206ENST00000426196 NPTXRO95502 500 aa15.75■□□□□ 0.11
HDAC6-206ENST00000426196 PROS1P07225 676 aa15.75■□□□□ 0.11
HDAC6-206ENST00000426196 P4HBP07237 508 aaKnown RBP15.75■□□□□ 0.11
HDAC6-206ENST00000426196 CEBPBP17676 345 aa15.75■□□□□ 0.11
HDAC6-206ENST00000426196 ARF4P18085 180 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-206ENST00000426196 CYP3A7P24462 503 aa15.75■□□□□ 0.11
HDAC6-206ENST00000426196 FNTBP49356 437 aa15.75■□□□□ 0.11
HDAC6-206ENST00000426196 SLC5A9Q2M3M2 681 aa15.75■□□□□ 0.11
HDAC6-206ENST00000426196 SLC27A1Q6PCB7 646 aa15.75■□□□□ 0.11
HDAC6-206ENST00000426196 CEP68Q76N32 757 aa15.75■□□□□ 0.11
HDAC6-206ENST00000426196 OTUD6AQ7L8S5 288 aa15.75■□□□□ 0.11
HDAC6-206ENST00000426196 C12orf50Q8NA57 414 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-206ENST00000426196 TRMT61BQ9BVS5 477 aaKnown RBP15.75■□□□□ 0.11
HDAC6-206ENST00000426196 SLKQ9H2G2 1235 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-206ENST00000426196 ZFP14Q9HCL3 533 aa15.75■□□□□ 0.11
HDAC6-206ENST00000426196 AVENQ9NQS1 362 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-206ENST00000426196 EML1O00423 815 aa15.74■□□□□ 0.11
HDAC6-206ENST00000426196 YWHABP31946 246 aaKnown RBP15.74■□□□□ 0.11
HDAC6-206ENST00000426196 OR1D2P34982 312 aa15.74■□□□□ 0.11
HDAC6-206ENST00000426196 NLRP5P59047 1200 aa15.74■□□□□ 0.11
HDAC6-206ENST00000426196 PPP2R5CQ13362 524 aa15.74■□□□□ 0.11
HDAC6-206ENST00000426196 XKR9Q5GH70 373 aa15.74■□□□□ 0.11
HDAC6-206ENST00000426196 MOXD1Q6UVY6 613 aa15.74■□□□□ 0.11
HDAC6-206ENST00000426196 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-206ENST00000426196 LONP2Q86WA8 852 aa15.74■□□□□ 0.11
HDAC6-206ENST00000426196 IFNLR1Q8IU57 520 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-206ENST00000426196 RNF26Q9BY78 433 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-206ENST00000426196 DDX25Q9UHL0 483 aaKnown RBP15.74■□□□□ 0.11
HDAC6-206ENST00000426196 PIAS3Q9Y6X2 628 aa15.74■□□□□ 0.11
HDAC6-206ENST00000426196 LRG1P02750 347 aa15.73■□□□□ 0.11
HDAC6-206ENST00000426196 HMGB1P09429 215 aaKnown RBP15.73■□□□□ 0.11
HDAC6-206ENST00000426196 FCARP24071 287 aa15.73■□□□□ 0.11
HDAC6-206ENST00000426196 MBTD1Q05BQ5 628 aa15.73■□□□□ 0.11
HDAC6-206ENST00000426196 POU5F1BQ06416 359 aa15.73■□□□□ 0.11
HDAC6-206ENST00000426196 SRSF5Q13243 272 aaKnown RBP15.73■□□□□ 0.11
HDAC6-206ENST00000426196 KRT32Q14532 448 aa15.73■□□□□ 0.11
HDAC6-206ENST00000426196 AMHR2Q16671 573 aa15.73■□□□□ 0.11
HDAC6-206ENST00000426196 C4orf19Q8IY42 314 aa15.73■□□□□ 0.11
HDAC6-206ENST00000426196 SPEM1Q8N4L4 309 aa15.73■□□□□ 0.11
HDAC6-206ENST00000426196 FAM160A2Q8N612 972 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-206ENST00000426196 LXNQ9BS40 222 aa15.73■□□□□ 0.11
HDAC6-206ENST00000426196 SLC26A6Q9BXS9 759 aa15.73■□□□□ 0.11
HDAC6-206ENST00000426196 ZNF334Q9HCZ1 680 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-206ENST00000426196 TRPV5Q9NQA5 729 aa15.73■□□□□ 0.11
HDAC6-206ENST00000426196 SH3GLB2Q9NR46 395 aa15.73■□□□□ 0.11
HDAC6-206ENST00000426196 WRAP73Q9P2S5 460 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-206ENST00000426196 NID2Q14112 1375 aa15.73■□□□□ 0.11
HDAC6-206ENST00000426196 WDFY3Q8IZQ1 3526 aa15.72■□□□□ 0.11
HDAC6-206ENST00000426196 THP07101 528 aa15.72■□□□□ 0.11
HDAC6-206ENST00000426196 PTPN2P17706 415 aa15.72■□□□□ 0.11
HDAC6-206ENST00000426196 GDI1P31150 447 aa15.72■□□□□ 0.11
HDAC6-206ENST00000426196 LRRC32Q14392 662 aa15.72■□□□□ 0.11
HDAC6-206ENST00000426196 HEATR6Q6AI08 1181 aaKnown RBP15.72■□□□□ 0.11
HDAC6-206ENST00000426196 CDR2LQ86X02 465 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-206ENST00000426196 MTRRQ9UBK8 725 aa15.72■□□□□ 0.11
HDAC6-206ENST00000426196 VAV3Q9UKW4 847 aa15.72■□□□□ 0.11
HDAC6-206ENST00000426196 PCDHA4Q9UN74 947 aa15.72■□□□□ 0.11
HDAC6-206ENST00000426196 CDY1Q9Y6F8 540 aa15.72■□□□□ 0.11
HDAC6-206ENST00000426196 TRIP11Q15643 1979 aa15.72■□□□□ 0.11
HDAC6-206ENST00000426196 ZNF197O14709 1029 aa15.71■□□□□ 0.11
HDAC6-206ENST00000426196 TM4SF5O14894 197 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms