RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 STRIP1Q5VSL9 837 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 CYP4F22Q6NT55 531 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 FAM47EQ6ZV65 393 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 CHURC1Q8WUH1 139 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 CPA5Q8WXQ8 436 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 PRCCQ92733 491 aaPredicted RBP8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 AGBL1Q96MI9 1066 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 NT5C1BQ96P26 610 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 STRA6Q9BX79 667 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 TRIM33Q9UPN9 1127 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 USTQ9Y2C2 406 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 ARFGEF1Q9Y6D6 1849 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 SMCHD1A6NHR9 2005 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 P4HA2O15460 535 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 CYP1A2P05177 515 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 GSTA1P08263 222 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 NQO1P15559 274 aaKnown RBP8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 RARRES1P49788 294 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 CDR2Q01850 454 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 CYP1B1Q16678 543 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 XKR9Q5GH70 373 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 HP1BP3Q5SSJ5 553 aaPredicted RBP8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 CYP4X1Q8N118 509 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 KIFAP3Q92845 792 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 VTI1AQ96AJ9 217 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 TACO1Q9BSH4 297 aaKnown RBP8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 LRRC19Q9H756 370 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 AHDC1Q5TGY3 1603 aaPredicted RBP8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 TTC4O95801 387 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 GAS8O95995 478 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 ITIH2P19823 946 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 NCALDP61601 193 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 MYBPC2Q14324 1141 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 PLA2G4FQ68DD2 849 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 KRT39Q6A163 491 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 ACAD10Q6JQN1 1059 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 VSTM1Q6UX27 236 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 CAPN12Q6ZSI9 719 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 GSTA5Q7RTV2 222 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 SPATA21Q7Z572 469 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 IL31RAQ8NI17 732 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 SHC3Q92529 594 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 SNF8Q96H20 258 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 SERPINB12Q96P63 405 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 TGS1Q96RS0 853 aaKnown RBP8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 HERPUD2Q9BSE4 406 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 ADAM33Q9BZ11 813 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 NKIRAS1Q9NYS0 192 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 UVRAGQ9P2Y5 699 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 SUFUQ9UMX1 484 aa8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 R3HDM2Q9Y2K5 976 aaKnown RBP8.04□□□□□ -1.12
SMARCC1-202ENST00000425518 DCAF8L1A6NGE4 600 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 A8MUI8 341 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 FSCN2O14926 492 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 ANP32DO95626 131 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 MYCLP12524 364 aaPredicted RBP8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 YWHABP31946 246 aaKnown RBP8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 QARSP47897 775 aaKnown RBP8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 ALDH5A1P51649 535 aaPredicted RBP8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 SOX10P56693 466 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 LMBRD2Q68DH5 695 aaPredicted RBP8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 MFSD5Q6N075 450 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 ZNF365Q70YC5 407 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 AGAP11Q8TF27 550 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 NSMCE1Q8WV22 266 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 CCDC134Q9H6E4 229 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 WHRNQ9P202 907 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 CCPG1Q9ULG6 757 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 NRAPQ86VF7 1730 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 EP400Q96L91 3159 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 CFAP73A6NFT4 308 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 RRM1P23921 792 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 CNGA1P29973 690 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 ATP5DP30049 168 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 CC2D2BQ6DHV5 1058 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 SEPT12Q8IYM1 358 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 MAGEC3Q8TD91 643 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 PSPC1Q8WXF1 523 aaKnown RBP8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 RIT2Q99578 217 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 RAB20Q9NX57 234 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 NAALADL1Q9UQQ1 740 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 TMX2Q9Y320 296 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 AFF2P51816 1311 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 O00370 1275 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 TP73O15350 636 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 SPAG7O75391 227 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 MTA2O94776 668 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 RALAP11233 206 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 MUTP22033 750 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 ADSSP30520 456 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 COPS2P61201 443 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 AOC3Q16853 763 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 TNFAIP8L3Q5GJ75 292 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 PASD1Q8IV76 773 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 FITM2Q8N6M3 262 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 FBXL13Q8NEE6 735 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 HELQQ8TDG4 1101 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 POMGNT1Q8WZA1 660 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 FAM212AQ96EL1 285 aa8.03□□□□□ -1.12
SMARCC1-202ENST00000425518 GLIS2Q9BZE0 524 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms