RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 IL17AQ16552 155 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 RILPL1Q5EBL4 403 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 GLYCTKQ8IVS8 523 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 DAW1Q8N136 415 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 SPRYD3Q8NCJ5 442 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 HASPINQ8TF76 798 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 PIK3R5Q8WYR1 880 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 KIFC3Q9BVG8 833 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 IRF2BPLQ9H1B7 796 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.3□□□□□ -0.12
VRK3-203ENST00000424804 ZDHHC7Q9NXF8 308 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 LRWD1Q9UFC0 647 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 FBXW11Q9UKB1 542 aa14.3□□□□□ -0.12
VRK3-203ENST00000424804 N4BP3O15049 544 aa14.29□□□□□ -0.12
VRK3-203ENST00000424804 MEFVO15553 781 aaPredicted RBP14.29□□□□□ -0.12
VRK3-203ENST00000424804 GFRA3O60609 400 aa14.29□□□□□ -0.12
VRK3-203ENST00000424804 NR1I2O75469 434 aa14.29□□□□□ -0.12
VRK3-203ENST00000424804 TADA2AO75478 443 aa14.29□□□□□ -0.12
VRK3-203ENST00000424804 LAMP2P13473 410 aa14.29□□□□□ -0.12
VRK3-203ENST00000424804 MUTP22033 750 aa14.29□□□□□ -0.12
VRK3-203ENST00000424804 CCT6AP40227 531 aaKnown RBP14.29□□□□□ -0.12
VRK3-203ENST00000424804 PRPF4BQ13523 1007 aaKnown RBP14.29□□□□□ -0.12
VRK3-203ENST00000424804 ZRSR1Q15695 479 aaKnown RBP14.29□□□□□ -0.12
VRK3-203ENST00000424804 POTEHQ6S545 545 aa14.29□□□□□ -0.12
VRK3-203ENST00000424804 RSPO2Q6UXX9 243 aaPredicted RBP14.29□□□□□ -0.12
VRK3-203ENST00000424804 TAS1R3Q7RTX0 852 aa14.29□□□□□ -0.12
VRK3-203ENST00000424804 HACE1Q8IYU2 909 aa14.29□□□□□ -0.12
VRK3-203ENST00000424804 PPP1R10Q96QC0 940 aaKnown RBP14.29□□□□□ -0.12
VRK3-203ENST00000424804 RPP25Q9BUL9 199 aaKnown RBP14.29□□□□□ -0.12
VRK3-203ENST00000424804 RAB34Q9BZG1 259 aa14.29□□□□□ -0.12
VRK3-203ENST00000424804 C2orf40Q9H1Z8 148 aa14.29□□□□□ -0.12
VRK3-203ENST00000424804 PTPRHQ9HD43 1115 aa14.29□□□□□ -0.12
VRK3-203ENST00000424804 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.29□□□□□ -0.12
VRK3-203ENST00000424804 WNT16Q9UBV4 365 aa14.29□□□□□ -0.12
VRK3-203ENST00000424804 GVINP1Q7Z2Y8 2422 aa14.29□□□□□ -0.12
VRK3-203ENST00000424804 SPDYE4A6NLX3 237 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 SF3B1O75533 1304 aaKnown RBP eCLIP14.28□□□□□ -0.123e-6■■■■■ 137.9
VRK3-203ENST00000424804 THP07101 528 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 FGFR3P22607 806 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 GBP2P32456 591 aaPredicted RBP14.28□□□□□ -0.12
VRK3-203ENST00000424804 MAPK6Q16659 721 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 XKR4Q5GH76 650 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 HAUS3Q68CZ6 603 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 ALKAL1Q6UXT8 129 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 DTHD1Q6ZMT9 781 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 ZBTB8OSQ8IWT0 167 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 SIX5Q8N196 739 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 IGSF22Q8N9C0 903 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 FLCNQ8NFG4 579 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 ST13P5Q8NFI4 369 aaPredicted RBP14.28□□□□□ -0.12
VRK3-203ENST00000424804 SNX29Q8TEQ0 813 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 TTPALQ9BTX7 342 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 MMTAG2Q9BU76 263 aaKnown RBP14.28□□□□□ -0.12
VRK3-203ENST00000424804 DPP7Q9UHL4 492 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 DCHS1Q96JQ0 3298 aa14.28□□□□□ -0.12
VRK3-203ENST00000424804 CACNA1IQ9P0X4 2223 aa14.27□□□□□ -0.12
VRK3-203ENST00000424804 MYH15Q9Y2K3 1946 aa14.27□□□□□ -0.12
VRK3-203ENST00000424804 ARHGEF35A5YM69 484 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 VWA3AA6NCI4 1184 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 PRR23AA6NEV1 266 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 PP2D1A8MPX8 630 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 TMEM189-UBE2V1I3L0A0 370 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 ABLIM1O14639 778 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 CFHP08603 1231 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 SYT1P21579 422 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 NTHL1P78549 312 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 MAPK7Q13164 816 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 HTR4Q13639 388 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 PDIA5Q14554 519 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 FAM171A1Q5VUB5 890 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 KCNK18Q7Z418 384 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 CCDC105Q8IYK2 499 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 CEP120Q8N960 986 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 C3orf58Q8NDZ4 430 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 BHMT2Q9H2M3 363 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 DLGAP2Q9P1A6 1054 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 KIAA1024Q9UPX6 916 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 ZNF292O60281 2723 aa14.27□□□□□ -0.13
VRK3-203ENST00000424804 COL4A3Q01955 1670 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 E9PMD0 336 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 LAD1O00515 517 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 SRFP11831 508 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 CDC25AP30304 524 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 SOX4Q06945 474 aaPredicted RBP14.26□□□□□ -0.13
VRK3-203ENST00000424804 RAB33AQ14088 237 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 PSMD5Q16401 504 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 FOXD4L5Q5VV16 416 aaPredicted RBP14.26□□□□□ -0.13
VRK3-203ENST00000424804 KRT79Q5XKE5 535 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 BRAPQ7Z569 592 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 GRASPQ7Z6J2 395 aaPredicted RBP14.26□□□□□ -0.13
VRK3-203ENST00000424804 FRMD5Q7Z6J6 570 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 DTWD2Q8NBA8 298 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 DEPTORQ8TB45 409 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 FOXD4L4Q8WXT5 416 aaPredicted RBP14.26□□□□□ -0.13
VRK3-203ENST00000424804 STAMQ92783 540 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 SNX21Q969T3 373 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 NXPE3Q969Y0 559 aa14.26□□□□□ -0.13
VRK3-203ENST00000424804 INTS4Q96HW7 963 aaKnown RBP14.26□□□□□ -0.13
VRK3-203ENST00000424804 ACO2Q99798 780 aaKnown RBP14.26□□□□□ -0.13
VRK3-203ENST00000424804 MFSD1Q9H3U5 465 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms