RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 GHRP10912 638 aa15.29■□□□□ 0.04
ACTN4-203ENST00000424234 CYP2C18P33260 490 aa15.29■□□□□ 0.04
ACTN4-203ENST00000424234 LPIN1Q14693 890 aa15.29■□□□□ 0.04
ACTN4-203ENST00000424234 TSHZ1Q6ZSZ6 1077 aa15.29■□□□□ 0.04
ACTN4-203ENST00000424234 TRIM43Q96BQ3 446 aaPredicted RBP15.29■□□□□ 0.04
ACTN4-203ENST00000424234 ACCSQ96QU6 501 aa15.29■□□□□ 0.04
ACTN4-203ENST00000424234 HTATIP2Q9BUP3 242 aa15.29■□□□□ 0.04
ACTN4-203ENST00000424234 KCTD10Q9H3F6 313 aa15.29■□□□□ 0.04
ACTN4-203ENST00000424234 AGO3Q9H9G7 860 aaKnown RBP15.29■□□□□ 0.04
ACTN4-203ENST00000424234 KIAA1671Q9BY89 1806 aa15.29■□□□□ 0.04
ACTN4-203ENST00000424234 ERLIN2O94905 339 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 PIGRP01833 764 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 ITGB8P26012 769 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 STRN3Q13033 797 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 SLC39A4Q6P5W5 647 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 ZC3H3Q8IXZ2 948 aaKnown RBP15.28■□□□□ 0.04
ACTN4-203ENST00000424234 C7orf61Q8IZ16 206 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 JAKMIP2Q96AA8 810 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 SCLYQ96I15 445 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 TSGA10Q9BZW7 698 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 PCDH10Q9P2E7 1040 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 PLAGL2Q9UPG8 496 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 USP20Q9Y2K6 914 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 SQORQ9Y6N5 450 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 TISP43B9A030 160 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 ACKR2O00590 384 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 HNRNPDLO14979 420 aaKnown RBP15.28■□□□□ 0.04
ACTN4-203ENST00000424234 NBNO60934 754 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 RPS6KA5O75582 802 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 ZRANB2O95218 330 aaKnown RBP eCLIP15.28■□□□□ 0.04
ACTN4-203ENST00000424234 ABL1P00519 1130 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 ARF4P18085 180 aaPredicted RBP15.28■□□□□ 0.04
ACTN4-203ENST00000424234 CCL23P55773 120 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 MARSP56192 900 aaKnown RBP15.28■□□□□ 0.04
ACTN4-203ENST00000424234 PRPF4BQ13523 1007 aaKnown RBP15.28■□□□□ 0.04
ACTN4-203ENST00000424234 GPNMBQ14956 572 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 PCBP1Q15365 356 aaKnown RBP eCLIP15.28■□□□□ 0.044e-7■■■■□ 20.7
ACTN4-203ENST00000424234 KNOP1Q1ED39 458 aaKnown RBP15.28■□□□□ 0.04
ACTN4-203ENST00000424234 CCDC40Q4G0X9 1142 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 CCDC122Q5T0U0 273 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 CATSPER4Q7RTX7 472 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 MRPL4Q9BYD3 311 aaKnown RBP15.28■□□□□ 0.04
ACTN4-203ENST00000424234 TMEM206Q9H813 350 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 ERVK-5Q9HDB9 667 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 MYO6Q9UM54 1294 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 GUCA1BQ9UMX6 200 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 EXOC7Q9UPT5 735 aa15.28■□□□□ 0.04
ACTN4-203ENST00000424234 TGFB1I1O43294 461 aa15.27■□□□□ 0.03
ACTN4-203ENST00000424234 TIMP1P01033 207 aa15.27■□□□□ 0.03
ACTN4-203ENST00000424234 CD52P31358 61 aa15.27■□□□□ 0.03
ACTN4-203ENST00000424234 AMPD2Q01433 879 aa15.27■□□□□ 0.03
ACTN4-203ENST00000424234 PAK2Q13177 524 aa15.27■□□□□ 0.03
ACTN4-203ENST00000424234 EDRF1Q3B7T1 1238 aa15.27■□□□□ 0.03
ACTN4-203ENST00000424234 USP38Q8NB14 1042 aa15.27■□□□□ 0.03
ACTN4-203ENST00000424234 NEK11Q8NG66 645 aa15.27■□□□□ 0.03
ACTN4-203ENST00000424234 BICD1Q96G01 975 aa15.27■□□□□ 0.03
ACTN4-203ENST00000424234 CPB2Q96IY4 423 aa15.27■□□□□ 0.03
ACTN4-203ENST00000424234 ACO2Q99798 780 aaKnown RBP15.27■□□□□ 0.03
ACTN4-203ENST00000424234 TARS2Q9BW92 718 aaKnown RBP15.27■□□□□ 0.03
ACTN4-203ENST00000424234 GBP3Q9H0R5 595 aa15.27■□□□□ 0.03
ACTN4-203ENST00000424234 MMRN2Q9H8L6 949 aa15.27■□□□□ 0.03
ACTN4-203ENST00000424234 TYW1Q9NV66 732 aaKnown RBP15.27■□□□□ 0.03
ACTN4-203ENST00000424234 ST3GAL5Q9UNP4 418 aa15.27■□□□□ 0.03
ACTN4-203ENST00000424234 NLRC5Q86WI3 1866 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 ANKRD63C9JTQ0 380 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 ABLIM1O14639 778 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 PROZP22891 400 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 LIG4P49917 911 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 VAV2P52735 878 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 BRD3Q15059 726 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 SPA17Q15506 151 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 ATF7IP2Q5U623 682 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 ZPBP2Q6X784 338 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 SYCP3Q8IZU3 236 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 CCDC42Q96M95 316 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 IFIH1Q9BYX4 1025 aaKnown RBP15.26■□□□□ 0.03
ACTN4-203ENST00000424234 NUCKS1Q9H1E3 243 aaKnown RBP15.26■□□□□ 0.03
ACTN4-203ENST00000424234 PDZD7Q9H5P4 517 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 TRIM10Q9UDY6 481 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 PADI3Q9ULW8 664 aa15.26■□□□□ 0.03
ACTN4-203ENST00000424234 PIN4Q9Y237 131 aaKnown RBP15.26■□□□□ 0.03
ACTN4-203ENST00000424234 TNRC18O15417 2968 aaPredicted RBP15.26■□□□□ 0.03
ACTN4-203ENST00000424234 CTAGE15A4D2H0 777 aa15.25■□□□□ 0.03
ACTN4-203ENST00000424234 LCA5LO95447 670 aa15.25■□□□□ 0.03
ACTN4-203ENST00000424234 PARNO95453 639 aaKnown RBP15.25■□□□□ 0.03
ACTN4-203ENST00000424234 CXCL10P02778 98 aa15.25■□□□□ 0.03
ACTN4-203ENST00000424234 CTAGE8P0CG41 777 aa15.25■□□□□ 0.03
ACTN4-203ENST00000424234 PNMA6AP0CW24 399 aaPredicted RBP15.25■□□□□ 0.03
ACTN4-203ENST00000424234 RAG1P15918 1043 aa15.25■□□□□ 0.03
ACTN4-203ENST00000424234 HOXA11P31270 313 aaPredicted RBP15.25■□□□□ 0.03
ACTN4-203ENST00000424234 GABPB1Q06547 395 aaPredicted RBP15.25■□□□□ 0.03
ACTN4-203ENST00000424234 NFX1Q12986 1120 aaKnown RBP15.25■□□□□ 0.03
ACTN4-203ENST00000424234 EEF1DP3Q658K8 133 aa15.25■□□□□ 0.03
ACTN4-203ENST00000424234 TRAPPC11Q7Z392 1133 aa15.25■□□□□ 0.03
ACTN4-203ENST00000424234 CTAGE6Q86UF2 777 aa15.25■□□□□ 0.03
ACTN4-203ENST00000424234 CDR2LQ86X02 465 aaPredicted RBP15.25■□□□□ 0.03
ACTN4-203ENST00000424234 CTAGE4Q8IX94 777 aa15.25■□□□□ 0.03
ACTN4-203ENST00000424234 VWCEQ96DN2 955 aa15.25■□□□□ 0.03
ACTN4-203ENST00000424234 PARD6BQ9BYG5 372 aa15.25■□□□□ 0.03
ACTN4-203ENST00000424234 AGPAT3Q9NRZ7 376 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms