RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 COL4A3Q01955 1670 aa20.56■□□□□ 0.88
AC004540.1-203ENST00000421862 ARHGEF35A5YM69 484 aa20.55■□□□□ 0.88
AC004540.1-203ENST00000421862 RBM25P49756 843 aaKnown RBP20.55■□□□□ 0.88
AC004540.1-203ENST00000421862 ELAVL2Q12926 359 aaKnown RBP20.55■□□□□ 0.88
AC004540.1-203ENST00000421862 PPP2R5AQ15172 486 aa20.55■□□□□ 0.88
AC004540.1-203ENST00000421862 SAFBQ15424 915 aaKnown RBP eCLIP20.55■□□□□ 0.88
AC004540.1-203ENST00000421862 DCAF4L1Q3SXM0 396 aa20.55■□□□□ 0.88
AC004540.1-203ENST00000421862 FAM171A1Q5VUB5 890 aa20.55■□□□□ 0.88
AC004540.1-203ENST00000421862 EEF1DP3Q658K8 133 aa20.55■□□□□ 0.88
AC004540.1-203ENST00000421862 HAUS3Q68CZ6 603 aa20.55■□□□□ 0.88
AC004540.1-203ENST00000421862 ADPGKQ9BRR6 497 aa20.55■□□□□ 0.88
AC004540.1-203ENST00000421862 FOXP1Q9H334 677 aaPredicted RBP20.55■□□□□ 0.88
AC004540.1-203ENST00000421862 NUMBLQ9Y6R0 609 aa20.55■□□□□ 0.88
AC004540.1-203ENST00000421862 WDR87Q6ZQQ6 2873 aa20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 COL4A2P08572 1712 aa20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 GUCY1B3Q02153 619 aa20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 LIN9Q5TKA1 542 aa20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 PHLDB3Q6NSJ2 640 aa20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 PDXDC1Q6P996 788 aa20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 NOSTRINQ8IVI9 506 aa20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 DEPTORQ8TB45 409 aa20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 GPR152Q8TDT2 470 aa20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 PPP1R10Q96QC0 940 aaKnown RBP20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 TBC1D17Q9HA65 648 aa20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 ARHGEF3Q9NR81 526 aa20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 DLGAP2Q9P1A6 1054 aa20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 CA14Q9ULX7 337 aa20.54■□□□□ 0.88
AC004540.1-203ENST00000421862 ADAM12O43184 909 aa20.53■□□□□ 0.88
AC004540.1-203ENST00000421862 C8AP07357 584 aa20.53■□□□□ 0.88
AC004540.1-203ENST00000421862 FGFR3P22607 806 aa20.53■□□□□ 0.88
AC004540.1-203ENST00000421862 FSHRP23945 695 aa20.53■□□□□ 0.88
AC004540.1-203ENST00000421862 FXR2P51116 673 aaKnown RBP eCLIP20.53■□□□□ 0.88
AC004540.1-203ENST00000421862 ECM1Q16610 540 aa20.53■□□□□ 0.88
AC004540.1-203ENST00000421862 C8orf76Q96K31 380 aa20.53■□□□□ 0.88
AC004540.1-203ENST00000421862 LLPHQ9BRT6 129 aaKnown RBP20.53■□□□□ 0.88
AC004540.1-203ENST00000421862 KIFC3Q9BVG8 833 aa20.53■□□□□ 0.88
AC004540.1-203ENST00000421862 MTRRQ9UBK8 725 aa20.53■□□□□ 0.88
AC004540.1-203ENST00000421862 USP20Q9Y2K6 914 aa20.53■□□□□ 0.88
AC004540.1-203ENST00000421862 CACNA1AO00555 2505 aa20.53■□□□□ 0.88
AC004540.1-203ENST00000421862 CACNA1IQ9P0X4 2223 aa20.52■□□□□ 0.88
AC004540.1-203ENST00000421862 EIF5BO60841 1220 aaKnown RBP20.52■□□□□ 0.88
AC004540.1-203ENST00000421862 TRAPPC10P48553 1259 aa20.52■□□□□ 0.88
AC004540.1-203ENST00000421862 EFNA5P52803 228 aa20.52■□□□□ 0.88
AC004540.1-203ENST00000421862 ZNF174Q15697 407 aa20.52■□□□□ 0.88
AC004540.1-203ENST00000421862 TTC38Q5R3I4 469 aa20.52■□□□□ 0.88
AC004540.1-203ENST00000421862 GRASPQ7Z6J2 395 aaPredicted RBP20.52■□□□□ 0.88
AC004540.1-203ENST00000421862 C4orf32Q8N8J7 132 aa20.52■□□□□ 0.88
AC004540.1-203ENST00000421862 KIFAP3Q92845 792 aa20.52■□□□□ 0.88
AC004540.1-203ENST00000421862 FGF14Q92915 247 aa20.52■□□□□ 0.88
AC004540.1-203ENST00000421862 CDH7Q9ULB5 785 aa20.52■□□□□ 0.88
AC004540.1-203ENST00000421862 PHLPP2Q6ZVD8 1323 aa20.52■□□□□ 0.87
AC004540.1-203ENST00000421862 RAB33AQ14088 237 aa20.51■□□□□ 0.87
AC004540.1-203ENST00000421862 PPM1LQ5SGD2 360 aa20.51■□□□□ 0.87
AC004540.1-203ENST00000421862 NT5DC1Q5TFE4 455 aa20.51■□□□□ 0.87
AC004540.1-203ENST00000421862 CD300LGQ6UXG3 332 aa20.51■□□□□ 0.87
AC004540.1-203ENST00000421862 CEP57Q86XR8 500 aa20.51■□□□□ 0.87
AC004540.1-203ENST00000421862 CCDC83Q8IWF9 413 aa20.51■□□□□ 0.87
AC004540.1-203ENST00000421862 FBXO18Q8NFZ0 1043 aa20.51■□□□□ 0.87
AC004540.1-203ENST00000421862 LIMCH1Q9UPQ0 1083 aa20.51■□□□□ 0.87
AC004540.1-203ENST00000421862 DMXL1Q9Y485 3027 aa20.51■□□□□ 0.87
AC004540.1-203ENST00000421862 OTOGLQ3ZCN5 2332 aa20.5■□□□□ 0.87
AC004540.1-203ENST00000421862 NEFLP07196 543 aa20.5■□□□□ 0.87
AC004540.1-203ENST00000421862 NTHL1P78549 312 aa20.5■□□□□ 0.87
AC004540.1-203ENST00000421862 TMEM132AQ24JP5 1023 aa20.5■□□□□ 0.87
AC004540.1-203ENST00000421862 ATF7IP2Q5U623 682 aa20.5■□□□□ 0.87
AC004540.1-203ENST00000421862 RTL10Q7L3V2 364 aa20.5■□□□□ 0.87
AC004540.1-203ENST00000421862 IGSF22Q8N9C0 903 aa20.5■□□□□ 0.87
AC004540.1-203ENST00000421862 SLC7A14Q8TBB6 771 aa20.5■□□□□ 0.87
AC004540.1-203ENST00000421862 IFT74Q96LB3 600 aa20.5■□□□□ 0.87
AC004540.1-203ENST00000421862 UROC1Q96N76 676 aa20.5■□□□□ 0.87
AC004540.1-203ENST00000421862 BHMT2Q9H2M3 363 aa20.5■□□□□ 0.87
AC004540.1-203ENST00000421862 TNFSF13BQ9Y275 285 aa20.5■□□□□ 0.87
AC004540.1-203ENST00000421862 GDAQ9Y2T3 454 aa20.5■□□□□ 0.87
AC004540.1-203ENST00000421862 XYLBO75191 536 aa20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 IGFBP6P24592 240 aaPredicted RBP20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 CLCNKBP51801 687 aa20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 STARD6P59095 220 aa20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 UPP1Q16831 310 aa20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 UVSSAQ2YD98 709 aa20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 XKR4Q5GH76 650 aa20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 GLRA4Q5JXX5 417 aa20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 PARM1Q6UWI2 310 aa20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 MTSS1LQ765P7 747 aa20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 C3orf58Q8NDZ4 430 aa20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 PJA1Q8NG27 643 aa20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 FGF13Q92913 245 aa20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 DDX27Q96GQ7 796 aaKnown RBP20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 RPP25Q9BUL9 199 aaKnown RBP20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 PPP4R2Q9NY27 417 aa20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 BACE2Q9Y5Z0 518 aa20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 EP300Q09472 2414 aaPredicted RBP20.49■□□□□ 0.87
AC004540.1-203ENST00000421862 FRYLO94915 3013 aa20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 CCL16O15467 120 aa20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 SEC24BO95487 1268 aa20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 LIG1P18858 919 aa20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 RFX1P22670 979 aa20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 CCT6AP40227 531 aaKnown RBP20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 GRM5P41594 1212 aa20.48■□□□□ 0.87
AC004540.1-203ENST00000421862 HMGN5P82970 282 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms