RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 SLC10A6Q3KNW5 377 aa21.1■□□□□ 0.97
GCDH-202ENST00000421816 ZBTB41Q5SVQ8 909 aa21.1■□□□□ 0.97
GCDH-202ENST00000421816 SPATA20Q8TB22 786 aa21.1■□□□□ 0.97
GCDH-202ENST00000421816 SPPL3Q8TCT6 385 aa21.1■□□□□ 0.97
GCDH-202ENST00000421816 POMGNT1Q8WZA1 660 aa21.1■□□□□ 0.97
GCDH-202ENST00000421816 GBP4Q96PP9 640 aa21.1■□□□□ 0.97
GCDH-202ENST00000421816 PPP1R10Q96QC0 940 aaKnown RBP21.1■□□□□ 0.97
GCDH-202ENST00000421816 LMAN2LQ9H0V9 348 aa21.1■□□□□ 0.97
GCDH-202ENST00000421816 ALG13Q9NP73 1137 aaKnown RBP21.1■□□□□ 0.97
GCDH-202ENST00000421816 SPG21Q9NZD8 308 aa21.1■□□□□ 0.97
GCDH-202ENST00000421816 CNTN3Q9P232 1028 aa21.1■□□□□ 0.97
GCDH-202ENST00000421816 CPSF3Q9UKF6 684 aaKnown RBP21.1■□□□□ 0.97
GCDH-202ENST00000421816 AGO2Q9UKV8 859 aaKnown RBP21.1■□□□□ 0.97
GCDH-202ENST00000421816 MTCH2Q9Y6C9 303 aa21.1■□□□□ 0.97
GCDH-202ENST00000421816 CDH23Q9H251 3354 aa21.1■□□□□ 0.97
GCDH-202ENST00000421816 SMIM28A0A1B0GU29 152 aa21.09■□□□□ 0.97
GCDH-202ENST00000421816 TGFB1I1O43294 461 aa21.09■□□□□ 0.97
GCDH-202ENST00000421816 THP07101 528 aa21.09■□□□□ 0.97
GCDH-202ENST00000421816 ADRB2P07550 413 aa21.09■□□□□ 0.97
GCDH-202ENST00000421816 KCNE1P15382 129 aa21.09■□□□□ 0.97
GCDH-202ENST00000421816 PLEKHA5Q9HAU0 1116 aa21.09■□□□□ 0.97
GCDH-202ENST00000421816 LMBRD1Q9NUN5 540 aa21.09■□□□□ 0.97
GCDH-202ENST00000421816 HOOK1Q9UJC3 728 aaKnown RBP21.09■□□□□ 0.97
GCDH-202ENST00000421816 STXBP5LQ9Y2K9 1186 aa21.09■□□□□ 0.97
GCDH-202ENST00000421816 ANK1P16157 1881 aa21.09■□□□□ 0.97
GCDH-202ENST00000421816 TTC26A0AVF1 554 aa21.08■□□□□ 0.97
GCDH-202ENST00000421816 NT5C1B-RDH14C9J2C7 533 aa21.08■□□□□ 0.97
GCDH-202ENST00000421816 NRP1O14786 923 aa21.08■□□□□ 0.97
GCDH-202ENST00000421816 ALDH2P05091 517 aa21.08■□□□□ 0.97
GCDH-202ENST00000421816 CXCL8P10145 99 aa21.08■□□□□ 0.97
GCDH-202ENST00000421816 DNAJB1P25685 340 aa21.08■□□□□ 0.97
GCDH-202ENST00000421816 SNRPFP62306 86 aaKnown RBP21.08■□□□□ 0.97
GCDH-202ENST00000421816 POU5F1Q01860 360 aaKnown RBP21.08■□□□□ 0.97
GCDH-202ENST00000421816 UBE3AQ05086 875 aa21.08■□□□□ 0.97
GCDH-202ENST00000421816 TUSC3Q13454 348 aa21.08■□□□□ 0.97
GCDH-202ENST00000421816 CAMK1Q14012 370 aa21.08■□□□□ 0.97
GCDH-202ENST00000421816 ENOX2Q16206 610 aaKnown RBP21.08■□□□□ 0.97
GCDH-202ENST00000421816 CRELD2Q6UXH1 353 aaPredicted RBP21.08■□□□□ 0.97
GCDH-202ENST00000421816 NELFCDQ8IXH7 590 aa21.08■□□□□ 0.97
GCDH-202ENST00000421816 MRPL38Q96DV4 380 aaKnown RBP21.08■□□□□ 0.97
GCDH-202ENST00000421816 IGSF21Q96ID5 467 aa21.08■□□□□ 0.97
GCDH-202ENST00000421816 ZMAT2Q96NC0 199 aaKnown RBP21.08■□□□□ 0.97
GCDH-202ENST00000421816 GSDMAQ96QA5 445 aa21.08■□□□□ 0.97
GCDH-202ENST00000421816 LZTS1Q9Y250 596 aa21.08■□□□□ 0.97
GCDH-202ENST00000421816 SMC2O95347 1197 aa21.07■□□□□ 0.96
GCDH-202ENST00000421816 IGFBP4P22692 258 aa21.07■□□□□ 0.96
GCDH-202ENST00000421816 ACOT2P49753 483 aa21.07■□□□□ 0.96
GCDH-202ENST00000421816 PTPROQ16827 1216 aa21.07■□□□□ 0.96
GCDH-202ENST00000421816 KNOP1Q1ED39 458 aaKnown RBP21.07■□□□□ 0.96
GCDH-202ENST00000421816 GLRA4Q5JXX5 417 aa21.07■□□□□ 0.96
GCDH-202ENST00000421816 TMEM173Q86WV6 379 aaPredicted RBP21.07■□□□□ 0.96
GCDH-202ENST00000421816 BCL7CQ8WUZ0 217 aaPredicted RBP21.07■□□□□ 0.96
GCDH-202ENST00000421816 CBWD1Q9BRT8 395 aa21.07■□□□□ 0.96
GCDH-202ENST00000421816 RPF1Q9H9Y2 349 aaKnown RBP21.07■□□□□ 0.96
GCDH-202ENST00000421816 RMND1Q9NWS8 449 aa21.07■□□□□ 0.96
GCDH-202ENST00000421816 FAN1Q9Y2M0 1017 aa21.07■□□□□ 0.96
GCDH-202ENST00000421816 PCDHA5Q9Y5H7 936 aa21.07■□□□□ 0.96
GCDH-202ENST00000421816 KIAA0391O15091 583 aaKnown RBP21.06■□□□□ 0.96
GCDH-202ENST00000421816 LDHAP00338 332 aaKnown RBP21.06■□□□□ 0.96
GCDH-202ENST00000421816 ARMCX5Q6P1M9 558 aa21.06■□□□□ 0.96
GCDH-202ENST00000421816 POF1BQ8WVV4 589 aa21.06■□□□□ 0.96
GCDH-202ENST00000421816 ERCC4Q92889 916 aaPredicted RBP21.06■□□□□ 0.96
GCDH-202ENST00000421816 AGPAT3Q9NRZ7 376 aa21.06■□□□□ 0.96
GCDH-202ENST00000421816 MARCH5Q9NX47 278 aa21.06■□□□□ 0.96
GCDH-202ENST00000421816 CGNQ9P2M7 1197 aaKnown RBP21.06■□□□□ 0.96
GCDH-202ENST00000421816 LACTBL1A8MY62 500 aa21.05■□□□□ 0.96
GCDH-202ENST00000421816 OR1G1P47890 313 aa21.05■□□□□ 0.96
GCDH-202ENST00000421816 KRT17Q04695 432 aa21.05■□□□□ 0.96
GCDH-202ENST00000421816 PPP2R3AQ06190 1150 aa21.05■□□□□ 0.96
GCDH-202ENST00000421816 CD302Q8IX05 232 aa21.05■□□□□ 0.96
GCDH-202ENST00000421816 C12orf56Q8IXR9 622 aa21.05■□□□□ 0.96
GCDH-202ENST00000421816 ZSWIM2Q8NEG5 633 aa21.05■□□□□ 0.96
GCDH-202ENST00000421816 SMARCE1Q969G3 411 aa21.05■□□□□ 0.96
GCDH-202ENST00000421816 TMEM169Q96HH4 297 aa21.05■□□□□ 0.96
GCDH-202ENST00000421816 TSPAN18Q96SJ8 248 aa21.05■□□□□ 0.96
GCDH-202ENST00000421816 KCTD10Q9H3F6 313 aa21.05■□□□□ 0.96
GCDH-202ENST00000421816 PCIF1Q9H4Z3 704 aa21.05■□□□□ 0.96
GCDH-202ENST00000421816 SLC38A7Q9NVC3 462 aa21.05■□□□□ 0.96
GCDH-202ENST00000421816 EXTL3O43909 919 aa21.04■□□□□ 0.96
GCDH-202ENST00000421816 KIF20AO95235 890 aa21.04■□□□□ 0.96
GCDH-202ENST00000421816 EFEMP2O95967 443 aa21.04■□□□□ 0.96
GCDH-202ENST00000421816 SOX4Q06945 474 aaPredicted RBP21.04■□□□□ 0.96
GCDH-202ENST00000421816 ZBTB6Q15916 424 aa21.04■□□□□ 0.96
GCDH-202ENST00000421816 HS2ST1Q7LGA3 356 aa21.04■□□□□ 0.96
GCDH-202ENST00000421816 DDX53Q86TM3 631 aaKnown RBP21.04■□□□□ 0.96
GCDH-202ENST00000421816 GPD1LQ8N335 351 aa21.04■□□□□ 0.96
GCDH-202ENST00000421816 GUF1Q8N442 669 aaKnown RBP21.04■□□□□ 0.96
GCDH-202ENST00000421816 SAAL1Q96ER3 474 aa21.04■□□□□ 0.96
GCDH-202ENST00000421816 PAAF1Q9BRP4 392 aa21.04■□□□□ 0.96
GCDH-202ENST00000421816 FAM213AQ9BRX8 229 aa21.04■□□□□ 0.96
GCDH-202ENST00000421816 COLEC11Q9BWP8 271 aa21.04■□□□□ 0.96
GCDH-202ENST00000421816 HSPBP1Q9NZL4 362 aa21.04■□□□□ 0.96
GCDH-202ENST00000421816 CACNG4Q9UBN1 327 aa21.04■□□□□ 0.96
GCDH-202ENST00000421816 PUF60Q9UHX1 559 aaKnown RBP21.04■□□□□ 0.96
GCDH-202ENST00000421816 PRG3Q9Y2Y8 225 aaPredicted RBP21.04■□□□□ 0.96
GCDH-202ENST00000421816 CASTOR2A6NHX0 329 aa21.03■□□□□ 0.96
GCDH-202ENST00000421816 F8W810 466 aa21.03■□□□□ 0.96
GCDH-202ENST00000421816 FSCN2O14926 492 aa21.03■□□□□ 0.96
GCDH-202ENST00000421816 HSP90AA2PQ14568 343 aaPredicted RBP21.03■□□□□ 0.96
GCDH-202ENST00000421816 COBLL1Q53SF7 1204 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms