RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 GOLGA6L22H0YM25 854 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 PTGESO14684 152 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 NRP1O14786 923 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 CXCL8P10145 99 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 STK4Q13043 487 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 ZBTB41Q5SVQ8 909 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 EPM2AIP1Q7L775 607 aaPredicted RBP17.17■□□□□ 0.34
BRAT1-202ENST00000421712 SLC39A11Q8N1S5 342 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 SCFD1Q8WVM8 642 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 RABGGTAQ92696 567 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 SMARCE1Q969G3 411 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 MRPL38Q96DV4 380 aaKnown RBP17.17■□□□□ 0.34
BRAT1-202ENST00000421712 SNX27Q96L92 541 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 COLEC11Q9BWP8 271 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 LMAN2LQ9H0V9 348 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 PCIF1Q9H4Z3 704 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 LMCD1Q9NZU5 365 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 STYXL1Q9Y6J8 313 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 CHD7Q9P2D1 2997 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 CHD9Q3L8U1 2897 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 UBE4BO95155 1302 aa17.17■□□□□ 0.34
BRAT1-202ENST00000421712 SMIM28A0A1B0GU29 152 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 CASTOR2A6NHX0 329 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 B4GALT3O60512 393 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 GARTP22102 1010 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 ADSSP30520 456 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 CA8P35219 290 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 PLCB3Q01970 1234 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 UBE3AQ05086 875 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 PPP2R3AQ06190 1150 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 TUSC3Q13454 348 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 SLC10A6Q3KNW5 377 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 CLEC17AQ6ZS10 378 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 HS2ST1Q7LGA3 356 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 MAFAQ8NHW3 353 aaPredicted RBP17.16■□□□□ 0.34
BRAT1-202ENST00000421712 ERCC4Q92889 916 aaPredicted RBP17.16■□□□□ 0.34
BRAT1-202ENST00000421712 SAAL1Q96ER3 474 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 IGSF21Q96ID5 467 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 FAM213AQ9BRX8 229 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 PLEKHA5Q9HAU0 1116 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 RMND1Q9NWS8 449 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 CACNG4Q9UBN1 327 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 TRIP11Q15643 1979 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 CITO14578 2027 aa17.16■□□□□ 0.34
BRAT1-202ENST00000421712 GOLGA8IPA6NC78 632 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 GOLGA8JA6NMD2 632 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 LACTBL1A8MY62 500 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 CLIC2O15247 247 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 RHOBTB3O94955 611 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 KIF20AO95235 890 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 LDHAP00338 332 aaKnown RBP17.15■□□□□ 0.34
BRAT1-202ENST00000421712 HOXD13P35453 343 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 SPAG1Q07617 926 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 DSC1Q08554 894 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 BMS1Q14692 1282 aaKnown RBP17.15■□□□□ 0.34
BRAT1-202ENST00000421712 KCNB1Q14721 858 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 SKIV2LQ15477 1246 aaKnown RBP17.15■□□□□ 0.34
BRAT1-202ENST00000421712 KNOP1Q1ED39 458 aaKnown RBP17.15■□□□□ 0.34
BRAT1-202ENST00000421712 ALKAL1Q6UXT8 129 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 KIAA0895Q8NCT3 520 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 KIF12Q96FN5 646 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 CBWD1Q9BRT8 395 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 TLR9Q9NR96 1032 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 SLC38A7Q9NVC3 462 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 CPSF3Q9UKF6 684 aaKnown RBP17.15■□□□□ 0.34
BRAT1-202ENST00000421712 MAPK8IP1Q9UQF2 711 aa17.15■□□□□ 0.34
BRAT1-202ENST00000421712 CDH23Q9H251 3354 aa17.14■□□□□ 0.33
BRAT1-202ENST00000421712 TADA2AO75478 443 aa17.14■□□□□ 0.33
BRAT1-202ENST00000421712 POU3F3P20264 500 aaPredicted RBP17.14■□□□□ 0.33
BRAT1-202ENST00000421712 DNAJB1P25685 340 aa17.14■□□□□ 0.33
BRAT1-202ENST00000421712 ENOX2Q16206 610 aaKnown RBP17.14■□□□□ 0.33
BRAT1-202ENST00000421712 XKR4Q5GH76 650 aa17.14■□□□□ 0.33
BRAT1-202ENST00000421712 TMC7Q7Z402 723 aa17.14■□□□□ 0.33
BRAT1-202ENST00000421712 TMEM173Q86WV6 379 aaPredicted RBP17.14■□□□□ 0.33
BRAT1-202ENST00000421712 ZMAT2Q96NC0 199 aaKnown RBP17.14■□□□□ 0.33
BRAT1-202ENST00000421712 GSDMAQ96QA5 445 aa17.14■□□□□ 0.33
BRAT1-202ENST00000421712 PPP1R10Q96QC0 940 aaKnown RBP17.14■□□□□ 0.33
BRAT1-202ENST00000421712 ENTPD7Q9NQZ7 604 aa17.14■□□□□ 0.33
BRAT1-202ENST00000421712 CNTN3Q9P232 1028 aa17.14■□□□□ 0.33
BRAT1-202ENST00000421712 LZTS1Q9Y250 596 aa17.14■□□□□ 0.33
BRAT1-202ENST00000421712 PCDHA5Q9Y5H7 936 aa17.14■□□□□ 0.33
BRAT1-202ENST00000421712 COL4A4P53420 1690 aaPredicted RBP17.13■□□□□ 0.33
BRAT1-202ENST00000421712 PRRC2BQ5JSZ5 2229 aaKnown RBP17.13■□□□□ 0.33
BRAT1-202ENST00000421712 TTC26A0AVF1 554 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 KIAA0391O15091 583 aaKnown RBP17.13■□□□□ 0.33
BRAT1-202ENST00000421712 EXTL3O43909 919 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 FAM189A1O60320 539 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 KCNE1P15382 129 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 CYP2J2P51589 502 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 SNRPFP62306 86 aaKnown RBP17.13■□□□□ 0.33
BRAT1-202ENST00000421712 HSP90AA2PQ14568 343 aaPredicted RBP17.13■□□□□ 0.33
BRAT1-202ENST00000421712 BMT2Q1RMZ1 405 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 TIGD5Q53EQ6 642 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 PLPP4Q5VZY2 271 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 DDX53Q86TM3 631 aaKnown RBP17.13■□□□□ 0.33
BRAT1-202ENST00000421712 CD302Q8IX05 232 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 ELOA2Q8IYF1 753 aaPredicted RBP17.13■□□□□ 0.33
BRAT1-202ENST00000421712 VPS52Q8N1B4 723 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 GPD1LQ8N335 351 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 HASPINQ8TF76 798 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms