RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 CXCL8P10145 99 aa22.5■■□□□ 1.19
HMGXB4-203ENST00000420166 PPM1AP35813 382 aa22.5■■□□□ 1.19
HMGXB4-203ENST00000420166 SLC11A1P49279 550 aa22.5■■□□□ 1.19
HMGXB4-203ENST00000420166 ALDH7A1P49419 539 aaKnown RBP22.5■■□□□ 1.19
HMGXB4-203ENST00000420166 KNOP1Q1ED39 458 aaKnown RBP22.5■■□□□ 1.19
HMGXB4-203ENST00000420166 SLC10A6Q3KNW5 377 aa22.5■■□□□ 1.19
HMGXB4-203ENST00000420166 ARMCX5Q6P1M9 558 aa22.5■■□□□ 1.19
HMGXB4-203ENST00000420166 COLGALT2Q8IYK4 626 aa22.5■■□□□ 1.19
HMGXB4-203ENST00000420166 SMARCE1Q969G3 411 aa22.5■■□□□ 1.19
HMGXB4-203ENST00000420166 CBWD1Q9BRT8 395 aa22.5■■□□□ 1.19
HMGXB4-203ENST00000420166 TMEM175Q9BSA9 504 aa22.5■■□□□ 1.19
HMGXB4-203ENST00000420166 SPG21Q9NZD8 308 aa22.5■■□□□ 1.19
HMGXB4-203ENST00000420166 CPSF3Q9UKF6 684 aaKnown RBP22.5■■□□□ 1.19
HMGXB4-203ENST00000420166 ATG2AQ2TAZ0 1938 aa22.49■■□□□ 1.19
HMGXB4-203ENST00000420166 TGFB1I1O43294 461 aa22.49■■□□□ 1.19
HMGXB4-203ENST00000420166 ITGB1P05556 798 aa22.49■■□□□ 1.19
HMGXB4-203ENST00000420166 THP07101 528 aa22.49■■□□□ 1.19
HMGXB4-203ENST00000420166 GALTP07902 379 aa22.49■■□□□ 1.19
HMGXB4-203ENST00000420166 ADGRE1Q14246 886 aa22.49■■□□□ 1.19
HMGXB4-203ENST00000420166 ENOX2Q16206 610 aaKnown RBP22.49■■□□□ 1.19
HMGXB4-203ENST00000420166 GLRA4Q5JXX5 417 aa22.49■■□□□ 1.19
HMGXB4-203ENST00000420166 SLC39A11Q8N1S5 342 aa22.49■■□□□ 1.19
HMGXB4-203ENST00000420166 PPP1R10Q96QC0 940 aaKnown RBP22.49■■□□□ 1.19
HMGXB4-203ENST00000420166 RPF1Q9H9Y2 349 aaKnown RBP22.49■■□□□ 1.19
HMGXB4-203ENST00000420166 PLEKHA5Q9HAU0 1116 aa22.49■■□□□ 1.19
HMGXB4-203ENST00000420166 CNTN3Q9P232 1028 aa22.49■■□□□ 1.19
HMGXB4-203ENST00000420166 SMIM28A0A1B0GU29 152 aa22.48■■□□□ 1.19
HMGXB4-203ENST00000420166 TTC26A0AVF1 554 aa22.48■■□□□ 1.19
HMGXB4-203ENST00000420166 FGF18O76093 207 aa22.48■■□□□ 1.19
HMGXB4-203ENST00000420166 KCNE1P15382 129 aa22.48■■□□□ 1.19
HMGXB4-203ENST00000420166 ACOT2P49753 483 aa22.48■■□□□ 1.19
HMGXB4-203ENST00000420166 TUSC3Q13454 348 aa22.48■■□□□ 1.19
HMGXB4-203ENST00000420166 NAB2Q15742 525 aa22.48■■□□□ 1.19
HMGXB4-203ENST00000420166 AGPAT3Q9NRZ7 376 aa22.48■■□□□ 1.19
HMGXB4-203ENST00000420166 NT5C1B-RDH14C9J2C7 533 aa22.47■■□□□ 1.19
HMGXB4-203ENST00000420166 KIAA0391O15091 583 aaKnown RBP22.47■■□□□ 1.19
HMGXB4-203ENST00000420166 GRM6O15303 877 aa22.47■■□□□ 1.19
HMGXB4-203ENST00000420166 SNRPFP62306 86 aaKnown RBP22.47■■□□□ 1.19
HMGXB4-203ENST00000420166 HS2ST1Q7LGA3 356 aa22.47■■□□□ 1.19
HMGXB4-203ENST00000420166 SPPL3Q8TCT6 385 aa22.47■■□□□ 1.19
HMGXB4-203ENST00000420166 SAAL1Q96ER3 474 aa22.47■■□□□ 1.19
HMGXB4-203ENST00000420166 ZMAT2Q96NC0 199 aaKnown RBP22.47■■□□□ 1.19
HMGXB4-203ENST00000420166 PCIF1Q9H4Z3 704 aa22.47■■□□□ 1.19
HMGXB4-203ENST00000420166 ALG13Q9NP73 1137 aaKnown RBP22.47■■□□□ 1.19
HMGXB4-203ENST00000420166 CGNQ9P2M7 1197 aaKnown RBP22.47■■□□□ 1.19
HMGXB4-203ENST00000420166 NRP1O14786 923 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 KIF20AO95235 890 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 LDHAP00338 332 aaKnown RBP22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 ALDH2P05091 517 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 ADRB2P07550 413 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 FOSL2P15408 326 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 POU3F3P20264 500 aaPredicted RBP22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 IGFBP4P22692 258 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 OR1G1P47890 313 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 POU5F1Q01860 360 aaKnown RBP22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 PLCB3Q01970 1234 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 PPP2R3AQ06190 1150 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 CRELD2Q6UXH1 353 aaPredicted RBP22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 TMEM173Q86WV6 379 aaPredicted RBP22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 GUF1Q8N442 669 aaKnown RBP22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 ZSWIM2Q8NEG5 633 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 IGSF21Q96ID5 467 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 FAM213AQ9BRX8 229 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 LMAN2LQ9H0V9 348 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 KCTD10Q9H3F6 313 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 SLC38A7Q9NVC3 462 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 FAN1Q9Y2M0 1017 aa22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 PRG3Q9Y2Y8 225 aaPredicted RBP22.46■■□□□ 1.19
HMGXB4-203ENST00000420166 LACTBL1A8MY62 500 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 EXTL3O43909 919 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 UBE3AQ05086 875 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 PTPROQ16827 1216 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 ZNF658Q5TYW1 1059 aaPredicted RBP22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 C12orf56Q8IXR9 622 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 SMYD4Q8IYR2 804 aaPredicted RBP22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 GOLGA5Q8TBA6 731 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 BCL7CQ8WUZ0 217 aaPredicted RBP22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 MRPL38Q96DV4 380 aaKnown RBP22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 TMEM169Q96HH4 297 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 GTPBP4Q9BZE4 634 aaKnown RBP22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 CLSTN2Q9H4D0 955 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 HSPBP1Q9NZL4 362 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 LMCD1Q9NZU5 365 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 CACNG4Q9UBN1 327 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 MAN1B1Q9UKM7 699 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 MAPK8IP1Q9UQF2 711 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 LZTS1Q9Y250 596 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 MTCH2Q9Y6C9 303 aa22.45■■□□□ 1.18
HMGXB4-203ENST00000420166 CDH23Q9H251 3354 aa22.44■■□□□ 1.18
HMGXB4-203ENST00000420166 GOLGA8IPA6NC78 632 aa22.44■■□□□ 1.18
HMGXB4-203ENST00000420166 CASTOR2A6NHX0 329 aa22.44■■□□□ 1.18
HMGXB4-203ENST00000420166 GOLGA8JA6NMD2 632 aa22.44■■□□□ 1.18
HMGXB4-203ENST00000420166 CLIC2O15247 247 aa22.44■■□□□ 1.18
HMGXB4-203ENST00000420166 KRT17Q04695 432 aa22.44■■□□□ 1.18
HMGXB4-203ENST00000420166 SOX4Q06945 474 aaPredicted RBP22.44■■□□□ 1.18
HMGXB4-203ENST00000420166 CAMK4Q16566 473 aa22.44■■□□□ 1.18
HMGXB4-203ENST00000420166 CD302Q8IX05 232 aa22.44■■□□□ 1.18
HMGXB4-203ENST00000420166 GPD1LQ8N335 351 aa22.44■■□□□ 1.18
HMGXB4-203ENST00000420166 POF1BQ8WVV4 589 aa22.44■■□□□ 1.18
HMGXB4-203ENST00000420166 FAM212AQ96EL1 285 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms