RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 OTUD6AQ7L8S5 288 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 NPAS3Q8IXF0 933 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 GPR161Q8N6U8 529 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 ITFG1Q8TB96 612 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 ASAP3Q8TDY4 903 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 RABGGTAQ92696 567 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 CLDN23Q96B33 292 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 AIFM3Q96NN9 605 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 TRIM6Q9C030 488 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 ZSWIM4Q9H7M6 989 aa11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 PRMT8Q9NR22 394 aaPredicted RBP11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 SMG5Q9UPR3 1016 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 TPRP12270 2363 aaKnown RBP11.34□□□□□ -0.59
TNFAIP3-202ENST00000420009 ACACBO00763 2458 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 A0A1B0GUA9 196 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 FAM170BA6NMN3 283 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 TADA2AO75478 443 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 KIF4AO95239 1232 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 TGM1P22735 817 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 TARSP26639 723 aaKnown RBP11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 ARL2P36404 184 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 ATXN1P54253 815 aaKnown RBP11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 CYP4A11Q02928 519 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 LMNB2Q03252 620 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 CSTF1Q05048 431 aaKnown RBP11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 SSRP1Q08945 709 aaKnown RBP11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 TUSC3Q13454 348 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 TOB2Q14106 344 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 PSMD5Q16401 504 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 PPM1LQ5SGD2 360 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 NEK8Q86SG6 692 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 LNX1Q8TBB1 728 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 ATRIPQ8WXE1 791 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 DYDC2Q96IM9 177 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 KXD1Q9BQD3 176 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 TTPALQ9BTX7 342 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 PHF20Q9BVI0 1012 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 SLKQ9H2G2 1235 aaPredicted RBP11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 ZSCAN32Q9NX65 697 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 KLK14Q9P0G3 267 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 DOCK6Q96HP0 2047 aa11.33□□□□□ -0.6
TNFAIP3-202ENST00000420009 SHISA7A6NL88 538 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 PRR5-ARHGAP8B1AHC4 643 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 PTGESO14684 152 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 CCL16O15467 120 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 ADAM12O43184 909 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 XYLBO75191 536 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 LYPLA2O95372 231 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 NPTXRO95502 500 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 CD72P21854 359 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 GLRA2P23416 452 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 RPS9P46781 194 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 VASPP50552 380 aaPredicted RBP11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 ARHGAP8P85298 464 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 CTTNQ14247 550 aaKnown RBP11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 ZBTB41Q5SVQ8 909 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 FAM171A1Q5VUB5 890 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 NCAPH2Q6IBW4 605 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 CDR2LQ86X02 465 aaPredicted RBP11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 SLC7A14Q8TBB6 771 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 HASPINQ8TF76 798 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 KCNH3Q9ULD8 1083 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 SPTBN2O15020 2390 aa11.32□□□□□ -0.6
TNFAIP3-202ENST00000420009 CCDC194A0A1B0GVG4 234 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 CASTOR2A6NHX0 329 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 ECI2O75521 394 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 DGAT1O75907 488 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 SLITRK3O94933 977 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 HOXB1P14653 301 aaPredicted RBP11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 PSMA5P28066 241 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 PDAP1Q13442 181 aaKnown RBP11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 FZD5Q13467 585 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 RAB33AQ14088 237 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 NAB2Q15742 525 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 AXDND1Q5T1B0 1012 aaPredicted RBP11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 PDXDC1Q6P996 788 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 TPRG1Q6ZUI0 275 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 ZNF687Q8N1G0 1237 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 SECISBP2LQ93073 1101 aaKnown RBP11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 NELL2Q99435 816 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 FAM126AQ9BYI3 521 aaPredicted RBP11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 PARD6AQ9NPB6 346 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 HCFC1R1Q9NWW0 138 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 DNMT3BQ9UBC3 853 aaKnown RBP11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 PARP2Q9UGN5 583 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 CDV3Q9UKY7 258 aaKnown RBP11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 KCNJ14Q9UNX9 436 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 NOTCH4Q99466 2003 aa11.31□□□□□ -0.6
TNFAIP3-202ENST00000420009 CPLX1O14810 134 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 TBC1D4O60343 1298 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 CCNT1O60563 726 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 TDGF1P13385 188 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 RARRES1P49788 294 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 ELAVL2Q12926 359 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 SLC5A9Q2M3M2 681 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 UVSSAQ2YD98 709 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 PABPC1LQ4VXU2 614 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 CDCA2Q69YH5 1023 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 TSSK4Q6SA08 328 aa11.3□□□□□ -0.6
TNFAIP3-202ENST00000420009 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms