RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 DRICH1Q6PGQ1 229 aaPredicted RBP4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 BTNL9Q6UXG8 535 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 TAS1R1Q7RTX1 841 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 AMOTL1Q8IY63 956 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 MSL3Q8N5Y2 521 aaKnown RBP4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 SIMC1Q8NDZ2 872 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 EAF2Q96CJ1 260 aaPredicted RBP4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 FDXACB1Q9BRP7 624 aaPredicted RBP4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 BRINP2Q9C0B6 783 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 PRSS50Q9UI38 385 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 COL4A3BPQ9Y5P4 624 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 CDY2AQ9Y6F7 541 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 SHROOM4Q9ULL8 1493 aa4.42□□□□□ -1.7
SDCBPP3-201ENST00000419629 PRKD3O94806 890 aa4.41□□□□□ -1.7
SDCBPP3-201ENST00000419629 HKR1P10072 659 aa4.41□□□□□ -1.7
SDCBPP3-201ENST00000419629 CDK11BP21127 795 aaKnown RBP4.41□□□□□ -1.7
SDCBPP3-201ENST00000419629 SLC5A3P53794 718 aa4.41□□□□□ -1.7
SDCBPP3-201ENST00000419629 NHLH2Q02577 135 aa4.41□□□□□ -1.7
SDCBPP3-201ENST00000419629 PDCD1Q15116 288 aa4.41□□□□□ -1.7
SDCBPP3-201ENST00000419629 EPHA10Q5JZY3 1008 aa4.41□□□□□ -1.7
SDCBPP3-201ENST00000419629 FAM177A1Q8N128 213 aaPredicted RBP4.41□□□□□ -1.7
SDCBPP3-201ENST00000419629 LMBR1Q8WVP7 490 aa4.41□□□□□ -1.7
SDCBPP3-201ENST00000419629 AUTS2Q8WXX7 1259 aa4.41□□□□□ -1.7
SDCBPP3-201ENST00000419629 ADAM2Q99965 735 aa4.41□□□□□ -1.7
SDCBPP3-201ENST00000419629 SPATA5L1Q9BVQ7 753 aa4.41□□□□□ -1.7
SDCBPP3-201ENST00000419629 C14orf119Q9NWQ9 140 aa4.41□□□□□ -1.7
SDCBPP3-201ENST00000419629 PHLDB1Q86UU1 1377 aa4.4□□□□□ -1.7
SDCBPP3-201ENST00000419629 LOC105371045A0A1W2PR82 267 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 KRTAP29-1A8MX34 341 aaPredicted RBP4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 DIRC3C9JPN6 131 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 K7ESF4 209 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 PRAMEF4O60810 478 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 C1RP00736 705 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 LPLP06858 475 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 LTA4HP09960 611 aaKnown RBP4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 MGAT1P26572 445 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 PLA2G5P39877 138 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 GUCY2FP51841 1108 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 KLF1Q13351 362 aaPredicted RBP4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 PTPROQ16827 1216 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 PDCD4Q53EL6 469 aaKnown RBP4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 SP5Q6BEB4 398 aaPredicted RBP4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 LHFPL2Q6ZUX7 228 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 CPEB3Q8NE35 698 aaKnown RBP4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 SSH1Q8WYL5 1049 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 FATE1Q969F0 183 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 CDC5LQ99459 802 aaKnown RBP4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 LRFN3Q9BTN0 628 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 QRSL1Q9H0R6 528 aaKnown RBP4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 PCDH12Q9NPG4 1184 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 DNAJC28Q9NX36 388 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 RNF181Q9P0P0 153 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 POGKQ9P215 609 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 DPP7Q9UHL4 492 aa4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 ARHGEF17Q96PE2 2063 aaPredicted RBP4.4□□□□□ -1.71
SDCBPP3-201ENST00000419629 A0A1W2PR48 441 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 UNC119BA6NIH7 251 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 MARCH11A6NNE9 402 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 PHF2O75151 1096 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 POU3F3P20264 500 aaPredicted RBP4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 DDX6P26196 483 aaKnown RBP eCLIP4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 MPLP40238 635 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 ELLP55199 621 aaPredicted RBP4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 ANAPC15P60006 121 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 BLOC1S1P78537 153 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 AMPD3Q01432 767 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 TP53BP2Q13625 1128 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 TRIM25Q14258 630 aaKnown RBP4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 ANO4Q32M45 955 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 C19orf54Q5BKX5 351 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 ABHD17BQ5VST6 288 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 ANKS6Q68DC2 871 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 CNTD1Q8N815 330 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 BOLLQ8N9W6 283 aaKnown RBP4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 OR10H5Q8NGA6 315 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 COG1Q8WTW3 980 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 TGFBRAP1Q8WUH2 860 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 ORAI2Q96SN7 254 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 EVLQ9UI08 416 aaPredicted RBP4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 TMPRSS11EQ9UL52 423 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 EDARQ9UNE0 448 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 NOP58Q9Y2X3 529 aaKnown RBP4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 MRFAP1Q9Y605 127 aa4.39□□□□□ -1.71
SDCBPP3-201ENST00000419629 hCG_2014768A0A024R1R8 64 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 SPDEFO95238 335 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 ESRRBO95718 433 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 ERBB2P04626 1255 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 EGR2P11161 476 aaPredicted RBP4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 ITKQ08881 620 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 UBE3CQ15386 1083 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 CLUL1Q15846 466 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 MUM1Q2TAK8 710 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 MUM1L1Q5H9M0 696 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 TOR2AQ5JU69 321 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 FAM102AQ5T9C2 384 aaPredicted RBP4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 METRNLQ641Q3 311 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 EFCAB12Q6NXP0 572 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 PDZD4Q76G19 769 aaPredicted RBP4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 LYSMD2Q8IV50 215 aa4.38□□□□□ -1.71
SDCBPP3-201ENST00000419629 SLC41A1Q8IVJ1 513 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms