RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 CDR2LQ86X02 465 aaPredicted RBP13.91□□□□□ -0.18
LINC00642-201ENST00000419459 CCDC170Q8IYT3 715 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 ZNF507Q8TCN5 953 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 P2RX5Q93086 422 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 PAWRQ96IZ0 340 aaKnown RBP13.91□□□□□ -0.18
LINC00642-201ENST00000419459 OSBPL7Q9BZF2 842 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 INO80BQ9C086 356 aaPredicted RBP13.91□□□□□ -0.18
LINC00642-201ENST00000419459 LUC7L2Q9Y383 392 aaKnown RBP13.91□□□□□ -0.18
LINC00642-201ENST00000419459 PCDHB13Q9Y5F0 798 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 K7ERI5 159 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 ARVCFO00192 962 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 EIF3DO15371 548 aaKnown RBP eCLIP13.91□□□□□ -0.18
LINC00642-201ENST00000419459 B4GALT5O43286 388 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 TGFB1I1O43294 461 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 GPR32O75388 356 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 IPO7O95373 1038 aaKnown RBP13.91□□□□□ -0.18
LINC00642-201ENST00000419459 ATP1A1P05023 1023 aaKnown RBP13.91□□□□□ -0.18
LINC00642-201ENST00000419459 PRLRP16471 622 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 MEA1Q16626 185 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 TTI2Q6NXR4 508 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 SYCP3Q8IZU3 236 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 BCAS4Q8TDM0 211 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 DHX38Q92620 1227 aaKnown RBP13.91□□□□□ -0.18
LINC00642-201ENST00000419459 TMEM106CQ9BVX2 250 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 TSGA10Q9BZW7 698 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 CAPN11Q9UMQ6 739 aa13.91□□□□□ -0.18
LINC00642-201ENST00000419459 HNRNPDLO14979 420 aaKnown RBP13.9□□□□□ -0.18
LINC00642-201ENST00000419459 EN2P19622 333 aaPredicted RBP13.9□□□□□ -0.18
LINC00642-201ENST00000419459 EEF1GP26641 437 aaKnown RBP13.9□□□□□ -0.18
LINC00642-201ENST00000419459 TNFRSF8P28908 595 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 HNRNPH1P31943 449 aaKnown RBP13.9□□□□□ -0.18
LINC00642-201ENST00000419459 THPOP40225 353 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 APBA1Q02410 837 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 BMT2Q1RMZ1 405 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 ZCWPW2Q504Y3 356 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 COBLL1Q53SF7 1204 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 CDCA2Q69YH5 1023 aaPredicted RBP13.9□□□□□ -0.18
LINC00642-201ENST00000419459 CENPPQ6IPU0 288 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 EMBQ6PCB8 327 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 ZSWIM2Q8NEG5 633 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 CAGE1Q8TC20 777 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 BICD1Q96G01 975 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 NUP58Q9BVL2 599 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 PLEKHA4Q9H4M7 779 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 ANKRD63C9JTQ0 380 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 CCNE1P24864 410 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 PTENP60484 403 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 MBTD1Q05BQ5 628 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 NNTQ13423 1086 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 TAF2Q6P1X5 1199 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 SLC39A4Q6P5W5 647 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 MICALCLQ6ZW33 695 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 YTHDF3Q7Z739 585 aaKnown RBP13.9□□□□□ -0.18
LINC00642-201ENST00000419459 KIAA1328Q86T90 577 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 MAP4K3Q8IVH8 894 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 SLC43A3Q8NBI5 491 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 IQCDQ96DY2 449 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 DHTKD1Q96HY7 919 aaPredicted RBP13.9□□□□□ -0.18
LINC00642-201ENST00000419459 DUSP9Q99956 384 aaKnown RBP13.9□□□□□ -0.18
LINC00642-201ENST00000419459 CCDC113Q9H0I3 377 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 VPS16Q9H269 839 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 ADAMTS10Q9H324 1103 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 ST6GALNAC4Q9H4F1 302 aa13.9□□□□□ -0.18
LINC00642-201ENST00000419459 SRRM3A6NNA2 597 aaPredicted RBP13.89□□□□□ -0.19
LINC00642-201ENST00000419459 LGALS16A8MUM7 142 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 ANKRD65E5RJM6 399 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 KIF1CO43896 1103 aaKnown RBP13.89□□□□□ -0.19
LINC00642-201ENST00000419459 FSBPO95073 299 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 LIG3P49916 1009 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 EPHB4P54760 987 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 CDK17Q00537 523 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 UBXN1Q04323 297 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 TFDP1Q14186 410 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 COL13A1Q5TAT6 717 aaPredicted RBP13.89□□□□□ -0.19
LINC00642-201ENST00000419459 STXBP4Q6ZWJ1 553 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 ZBTB8OSQ8IWT0 167 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 FAM126BQ8IXS8 530 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 CSGALNACT2Q8N6G5 542 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 NOC3LQ8WTT2 800 aaKnown RBP13.89□□□□□ -0.19
LINC00642-201ENST00000419459 ZBTB45Q96K62 511 aaPredicted RBP13.89□□□□□ -0.19
LINC00642-201ENST00000419459 CHP1Q99653 195 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 CBWD1Q9BRT8 395 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 TARS2Q9BW92 718 aaKnown RBP13.89□□□□□ -0.19
LINC00642-201ENST00000419459 PCIF1Q9H4Z3 704 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 TAB2Q9NYJ8 693 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 ANKFY1Q9P2R3 1169 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 GGA2Q9UJY4 613 aa13.89□□□□□ -0.19
LINC00642-201ENST00000419459 TTC26A0AVF1 554 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 RNF225M0QZC1 329 aaPredicted RBP13.88□□□□□ -0.19
LINC00642-201ENST00000419459 CHRNA1P02708 482 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 PRKCBP05771 671 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 COL6A1P12109 1028 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 NR2F2P24468 414 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 ADSSP30520 456 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 PHKA2P46019 1235 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 CDK7P50613 346 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 MNAT1P51948 309 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 GNGT1P63211 74 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 STRN3Q13033 797 aa13.88□□□□□ -0.19
LINC00642-201ENST00000419459 MAPK6Q16659 721 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms