RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 MRPL9Q9BYD2 267 aaKnown RBP9.2□□□□□ -0.94
TRIM48-201ENST00000417545 THAP9Q9H5L6 903 aa9.2□□□□□ -0.94
TRIM48-201ENST00000417545 ELAC1Q9H777 363 aaKnown RBP9.2□□□□□ -0.94
TRIM48-201ENST00000417545 METTL14Q9HCE5 456 aaKnown RBP9.2□□□□□ -0.94
TRIM48-201ENST00000417545 PTPRHQ9HD43 1115 aa9.2□□□□□ -0.94
TRIM48-201ENST00000417545 KLK14Q9P0G3 267 aa9.2□□□□□ -0.94
TRIM48-201ENST00000417545 ARMCX3Q9UH62 379 aaPredicted RBP9.2□□□□□ -0.94
TRIM48-201ENST00000417545 GIT1Q9Y2X7 761 aa9.2□□□□□ -0.94
TRIM48-201ENST00000417545 NFE2L3Q9Y4A8 694 aa9.2□□□□□ -0.94
TRIM48-201ENST00000417545 STYXL1Q9Y6J8 313 aa9.2□□□□□ -0.94
TRIM48-201ENST00000417545 TBKBP1A7MCY6 615 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 PHACTR2O75167 634 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 TNNC2P02585 160 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 PRKCSHP14314 528 aaPredicted RBP9.19□□□□□ -0.94
TRIM48-201ENST00000417545 ATP2A2P16615 1042 aaKnown RBP9.19□□□□□ -0.94
TRIM48-201ENST00000417545 TNNI1P19237 187 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 ADSSP30520 456 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 MLH1P40692 756 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 PMS1P54277 932 aaKnown RBP9.19□□□□□ -0.94
TRIM48-201ENST00000417545 DEFB103AP81534 67 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 PLCB2Q00722 1185 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 SPAG1Q07617 926 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 TMEM132DQ14C87 1099 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 TCTN1Q2MV58 587 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 PAN2Q504Q3 1202 aaKnown RBP9.19□□□□□ -0.94
TRIM48-201ENST00000417545 FOXR2Q6PJQ5 311 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 INTS8Q75QN2 995 aaKnown RBP9.19□□□□□ -0.94
TRIM48-201ENST00000417545 FILIP1Q7Z7B0 1213 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 CBWD2Q8IUF1 395 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 BRSK2Q8IWQ3 736 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 SMG8Q8ND04 991 aaKnown RBP9.19□□□□□ -0.94
TRIM48-201ENST00000417545 RNF214Q8ND24 703 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 ENOX1Q8TC92 643 aaKnown RBP9.19□□□□□ -0.94
TRIM48-201ENST00000417545 CACTINQ8WUQ7 758 aaKnown RBP9.19□□□□□ -0.94
TRIM48-201ENST00000417545 CCDC127Q96BQ5 260 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 KIF12Q96FN5 646 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 ANKRD36BP1Q96IX9 119 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 CNOT6LQ96LI5 555 aaKnown RBP9.19□□□□□ -0.94
TRIM48-201ENST00000417545 BPIFA3Q9BQP9 254 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 MKNK1Q9BUB5 465 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 TRAIPQ9BWF2 469 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 MMRN2Q9H8L6 949 aa9.19□□□□□ -0.94
TRIM48-201ENST00000417545 CPSF3Q9UKF6 684 aaKnown RBP9.19□□□□□ -0.94
TRIM48-201ENST00000417545 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.18□□□□□ -0.94
TRIM48-201ENST00000417545 ABLIM1O14639 778 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 IKBKBO14920 756 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 TLL1O43897 1013 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 ZNF623O75123 536 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 THP07101 528 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 FGFR1P11362 822 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 CASP4P49662 377 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 SCNN1GP51170 649 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 VAMP7P51809 220 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 EPHB4P54760 987 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 TFAMQ00059 246 aaKnown RBP9.18□□□□□ -0.94
TRIM48-201ENST00000417545 CYP24A1Q07973 514 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 CETN1Q12798 172 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 BIRC3Q13489 604 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 BTG3Q14201 252 aaPredicted RBP9.18□□□□□ -0.94
TRIM48-201ENST00000417545 NOMO2Q5JPE7 1267 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 GLRA4Q5JXX5 417 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 ZBTB41Q5SVQ8 909 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 MRPL10Q7Z7H8 261 aaKnown RBP9.18□□□□□ -0.94
TRIM48-201ENST00000417545 RTN4RL1Q86UN2 441 aaPredicted RBP9.18□□□□□ -0.94
TRIM48-201ENST00000417545 TMEM192Q8IY95 271 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 BEST2Q8NFU1 509 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 RSPH1Q8WYR4 309 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 SNX27Q96L92 541 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 GAD1Q99259 594 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 DUSP9Q99956 384 aaKnown RBP9.18□□□□□ -0.94
TRIM48-201ENST00000417545 FUCA2Q9BTY2 467 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 HAPLN2Q9GZV7 340 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 TMEM117Q9H0C3 514 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 ASB7Q9H672 318 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 PLEKHA5Q9HAU0 1116 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 CBX8Q9HC52 389 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 SLC38A7Q9NVC3 462 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 KANSL3Q9P2N6 904 aa9.18□□□□□ -0.94
TRIM48-201ENST00000417545 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.18□□□□□ -0.94
TRIM48-201ENST00000417545 ANK1P16157 1881 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 PDCD11Q14690 1871 aaKnown RBP9.17□□□□□ -0.94
TRIM48-201ENST00000417545 TRIP11Q15643 1979 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 ARL5CA6NH57 179 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 LACTBL1A8MY62 500 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 KCNJ18B7U540 433 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 MAPK13O15264 365 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 N4BP1O75113 896 aaKnown RBP9.17□□□□□ -0.94
TRIM48-201ENST00000417545 AKAP3O75969 853 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 SERPINC1P01008 464 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 POMCP01189 267 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 ADRB2P07550 413 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 KRT19P08727 400 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 EEF1GP26641 437 aaKnown RBP9.17□□□□□ -0.94
TRIM48-201ENST00000417545 FAM189BP81408 668 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 POU5F1Q01860 360 aaKnown RBP9.17□□□□□ -0.94
TRIM48-201ENST00000417545 BFSP1Q12934 665 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 GRIK3Q13003 919 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 KCNJ12Q14500 433 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 PSMD6Q15008 389 aa9.17□□□□□ -0.94
TRIM48-201ENST00000417545 SHHQ15465 462 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms