RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 TREML1Q86YW5 311 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 ZBED8Q8IZ13 594 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 NUP93Q8N1F7 819 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 CEP70Q8NHQ1 597 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 TPCN2Q8NHX9 752 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 GLG1Q92896 1179 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 TNFRSF25Q93038 417 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 FNBP1Q96RU3 617 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 METTL22Q9BUU2 404 aaPredicted RBP6.81□□□□□ -1.32
CCNT1-202ENST00000417344 TRAIPQ9BWF2 469 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 EIF2AQ9BY44 585 aaKnown RBP6.81□□□□□ -1.32
CCNT1-202ENST00000417344 TMEM60Q9H2L4 133 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 KBTBD4Q9NVX7 518 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 GRHL1Q9NZI5 618 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 KIAA1522Q9P206 1035 aaPredicted RBP6.81□□□□□ -1.32
CCNT1-202ENST00000417344 ZFP69BQ9UJL9 534 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 PHTF1Q9UMS5 762 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 STXBP5LQ9Y2K9 1186 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 NR2E1Q9Y466 385 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 MAP4K5Q9Y4K4 846 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 HEY1Q9Y5J3 304 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 PIK3C2AO00443 1686 aa6.81□□□□□ -1.32
CCNT1-202ENST00000417344 METP08581 1390 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 TMEM110-MUSTN1A8MSY1 372 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 IPO5O00410 1097 aaKnown RBP6.8□□□□□ -1.32
CCNT1-202ENST00000417344 MAGEB2O15479 319 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 ZNF862O60290 1169 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 SERPINB7O75635 380 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 ZWINTO95229 277 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 TRAPPC10P48553 1259 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 KLHL30Q0D2K2 578 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 CDC16Q13042 620 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 THOC5Q13769 683 aaKnown RBP6.8□□□□□ -1.32
CCNT1-202ENST00000417344 SPIDRQ14159 915 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 WTAPQ15007 396 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 SLC45A4Q5BKX6 768 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 C4orf48Q5BLP8 95 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 ARL6IP4Q66PJ3 421 aaKnown RBP6.8□□□□□ -1.32
CCNT1-202ENST00000417344 C1orf228Q6PIY5 440 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 SLC2A7Q6PXP3 512 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 RBM44Q6ZP01 1051 aaKnown RBP6.8□□□□□ -1.32
CCNT1-202ENST00000417344 TMTC3Q6ZXV5 915 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 SLFN11Q7Z7L1 901 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 ALDH16A1Q8IZ83 802 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 SYCE1Q8N0S2 351 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 SDR16C5Q8N3Y7 309 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 OGFOD1Q8N543 542 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 FANCBQ8NB91 859 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 C10orf82Q8WW14 230 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 MCUR1Q96AQ8 359 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 HSPBAP1Q96EW2 488 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 HES6Q96HZ4 224 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 TAOK3Q9H2K8 898 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 SEMA6BQ9H3T3 888 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 EBF3Q9H4W6 596 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 USP29Q9HBJ7 922 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 HESX1Q9UBX0 185 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 ARMCX3Q9UH62 379 aaPredicted RBP6.8□□□□□ -1.32
CCNT1-202ENST00000417344 RTCBQ9Y3I0 505 aaKnown RBP6.8□□□□□ -1.32
CCNT1-202ENST00000417344 FADS3Q9Y5Q0 445 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 MYH2Q9UKX2 1941 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 HEG1Q9ULI3 1381 aa6.8□□□□□ -1.32
CCNT1-202ENST00000417344 E9PBE3 544 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 GYG2O15488 501 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 NDUFB5O43674 189 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 PRDM1O75626 825 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 NOL4O94818 638 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 FGFR1OPO95684 399 aaKnown RBP6.79□□□□□ -1.32
CCNT1-202ENST00000417344 PDGFRBP09619 1106 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 FCER1AP12319 257 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 HOXC9P31274 260 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 NEK2P51955 445 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 RCAN1P53805 252 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 ARID5AQ03989 594 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 DNAJC3Q13217 504 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 RAPGEF1Q13905 1077 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 RRP1BQ14684 758 aaKnown RBP6.79□□□□□ -1.32
CCNT1-202ENST00000417344 CTC1Q2NKJ3 1217 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 CENPPQ6IPU0 288 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 KLHDC10Q6PID8 442 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 LMBR1LQ6UX01 489 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 Q6ZNX1 250 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 TRMT10CQ7L0Y3 403 aaKnown RBP6.79□□□□□ -1.32
CCNT1-202ENST00000417344 PHLDB2Q86SQ0 1253 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 PATL1Q86TB9 770 aaKnown RBP6.79□□□□□ -1.32
CCNT1-202ENST00000417344 NT5DC3Q86UY8 548 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 IQCF2Q8IXL9 164 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 SCYL3Q8IZE3 742 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 VPS52Q8N1B4 723 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 BBS5Q8N3I7 341 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 PRICKLE1Q96MT3 831 aaPredicted RBP6.79□□□□□ -1.32
CCNT1-202ENST00000417344 SRPK1Q96SB4 655 aaKnown RBP6.79□□□□□ -1.32
CCNT1-202ENST00000417344 TUBB6Q9BUF5 446 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 STK33Q9BYT3 514 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 PRKD2Q9BZL6 878 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 TANGO6Q9C0B7 1094 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 BHMT2Q9H2M3 363 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 CNNM2Q9H8M5 875 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 NDE1Q9NXR1 346 aa6.79□□□□□ -1.32
CCNT1-202ENST00000417344 SAP30BPQ9UHR5 308 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms