RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 SHDQ96IW2 340 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 OSBPL6Q9BZF3 934 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 CCDC113Q9H0I3 377 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 DLL3Q9NYJ7 618 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 ORC3Q9UBD5 711 aaPredicted RBP13.46□□□□□ -0.25
LIMS2-210ENST00000413578 COL4A3Q01955 1670 aa13.46□□□□□ -0.26
LIMS2-210ENST00000413578 FRYLO94915 3013 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 MTCL1Q9Y4B5 1905 aaKnown RBP13.45□□□□□ -0.26
LIMS2-210ENST00000413578 LRRIQ4A6NIV6 560 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 SHISA7A6NL88 538 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 TMEM189-UBE2V1I3L0A0 370 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 RECQL4O94761 1208 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 THP07101 528 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 FGFR3P22607 806 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 IGFBP6P24592 240 aaPredicted RBP13.45□□□□□ -0.26
LIMS2-210ENST00000413578 ELAVL2Q12926 359 aaKnown RBP13.45□□□□□ -0.26
LIMS2-210ENST00000413578 SNW1Q13573 536 aaKnown RBP13.45□□□□□ -0.26
LIMS2-210ENST00000413578 MLF2Q15773 248 aaPredicted RBP13.45□□□□□ -0.26
LIMS2-210ENST00000413578 UVSSAQ2YD98 709 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 PPM1LQ5SGD2 360 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 POTEHQ6S545 545 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 CD300LGQ6UXG3 332 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 RSPO2Q6UXX9 243 aaPredicted RBP13.45□□□□□ -0.26
LIMS2-210ENST00000413578 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.45□□□□□ -0.26
LIMS2-210ENST00000413578 MTSS1LQ765P7 747 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 NPAS3Q8IXF0 933 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 DCLK2Q8N568 766 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 WASF1Q92558 559 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 NELL1Q92832 810 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 SNTG2Q9NY99 539 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 DNMT3BQ9UBC3 853 aaKnown RBP13.45□□□□□ -0.26
LIMS2-210ENST00000413578 MTRRQ9UBK8 725 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 FBXO4Q9UKT5 387 aa13.45□□□□□ -0.26
LIMS2-210ENST00000413578 MTF2Q9Y483 593 aaPredicted RBP13.45□□□□□ -0.26
LIMS2-210ENST00000413578 FANCMQ8IYD8 2048 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 ACKR2O00590 384 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 N4BP3O15049 544 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 CCL16O15467 120 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 NEMFO60524 1076 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 XYLBO75191 536 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 TXKP42681 527 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 RBM25P49756 843 aaKnown RBP13.44□□□□□ -0.26
LIMS2-210ENST00000413578 PUM1Q14671 1186 aaKnown RBP eCLIP13.44□□□□□ -0.26
LIMS2-210ENST00000413578 SLC44A4Q53GD3 710 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 EEF1DP3Q658K8 133 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 PDXDC1Q6P996 788 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 RTL10Q7L3V2 364 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 DGLUCYQ7Z3D6 616 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 CATSPER3Q86XQ3 398 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 CEP57Q86XR8 500 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 MCPH1Q8NEM0 835 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 SLC7A14Q8TBB6 771 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 BORCS6Q96GS4 357 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 TMEM60Q9H2L4 133 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 TUFT1Q9NNX1 390 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 LTB4R2Q9NPC1 389 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 HCFC1R1Q9NWW0 138 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 KCNH3Q9ULD8 1083 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 USP20Q9Y2K6 914 aa13.44□□□□□ -0.26
LIMS2-210ENST00000413578 TDRD15B5MCY1 1934 aaKnown RBP13.44□□□□□ -0.26
LIMS2-210ENST00000413578 EPG5Q9HCE0 2579 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 BTBD18B2RXH4 712 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 SPTLC1O15269 473 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 MED24O75448 989 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 MAGEA9P43362 315 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 PFKPQ01813 784 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 FZD5Q13467 585 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 AXDND1Q5T1B0 1012 aaPredicted RBP13.43□□□□□ -0.26
LIMS2-210ENST00000413578 MAEAQ7L5Y9 396 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 NOSTRINQ8IVI9 506 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 ZBTB8OSQ8IWT0 167 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 ZBTB44Q8NCP5 570 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 CLDN23Q96B33 292 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 CCDC43Q96MW1 224 aaKnown RBP13.43□□□□□ -0.26
LIMS2-210ENST00000413578 PPP1R10Q96QC0 940 aaKnown RBP13.43□□□□□ -0.26
LIMS2-210ENST00000413578 BCO2Q9BYV7 579 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 C2orf40Q9H1Z8 148 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 BRMS1Q9HCU9 246 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 AVENQ9NQS1 362 aaPredicted RBP13.43□□□□□ -0.26
LIMS2-210ENST00000413578 BACE2Q9Y5Z0 518 aa13.43□□□□□ -0.26
LIMS2-210ENST00000413578 DOCK6Q96HP0 2047 aa13.42□□□□□ -0.26
LIMS2-210ENST00000413578 KINO60870 393 aaKnown RBP13.42□□□□□ -0.26
LIMS2-210ENST00000413578 ECI2O75521 394 aa13.42□□□□□ -0.26
LIMS2-210ENST00000413578 PRKCBP05771 671 aa13.42□□□□□ -0.26
LIMS2-210ENST00000413578 OR1D2P34982 312 aa13.42□□□□□ -0.26
LIMS2-210ENST00000413578 NAMPTP43490 491 aa13.42□□□□□ -0.26
LIMS2-210ENST00000413578 PRPF4BQ13523 1007 aaKnown RBP13.42□□□□□ -0.26
LIMS2-210ENST00000413578 MAPK6Q16659 721 aa13.42□□□□□ -0.26
LIMS2-210ENST00000413578 ME3Q16798 604 aa13.42□□□□□ -0.26
LIMS2-210ENST00000413578 SLC5A9Q2M3M2 681 aa13.42□□□□□ -0.26
LIMS2-210ENST00000413578 PABPC1LQ4VXU2 614 aaKnown RBP13.42□□□□□ -0.26
LIMS2-210ENST00000413578 DIS3L2Q8IYB7 885 aaKnown RBP13.42□□□□□ -0.26
LIMS2-210ENST00000413578 ZNF687Q8N1G0 1237 aa13.42□□□□□ -0.26
LIMS2-210ENST00000413578 NSUN7Q8NE18 718 aaKnown RBP13.42□□□□□ -0.26
LIMS2-210ENST00000413578 GTF3C6Q969F1 213 aa13.42□□□□□ -0.26
LIMS2-210ENST00000413578 DDX27Q96GQ7 796 aaKnown RBP13.42□□□□□ -0.26
LIMS2-210ENST00000413578 KXD1Q9BQD3 176 aa13.42□□□□□ -0.26
LIMS2-210ENST00000413578 POLR3CQ9BUI4 534 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-210ENST00000413578 DAXXQ9UER7 740 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-210ENST00000413578 POLIQ9UNA4 740 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms