RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 NSMCE1Q8WV22 266 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 STK33Q9BYT3 514 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 PDGFCQ9NRA1 345 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 ABHD10Q9NUJ1 306 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 CAPN11Q9UMQ6 739 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 LRRC53A6NM62 1247 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 A8MXQ7 604 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 POLR3GO15318 223 aaPredicted RBP9.11□□□□□ -0.95
SYNE1-211ENST00000413186 GMNNO75496 209 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 ABL1P00519 1130 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 CALB1P05937 261 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 SPATA31C1P0DKV0 1188 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 ARPP19P56211 112 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 CEP120Q8N960 986 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 CCDC77Q9BR77 488 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 MTRF1LQ9UGC7 380 aaKnown RBP9.11□□□□□ -0.95
SYNE1-211ENST00000413186 ADAMTS1Q9UHI8 967 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 CDC23Q9UJX2 597 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 ATP11BQ9Y2G3 1177 aa9.11□□□□□ -0.95
SYNE1-211ENST00000413186 TEX33O43247 280 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 NOL3O60936 208 aaKnown RBP9.1□□□□□ -0.95
SYNE1-211ENST00000413186 SMIM10L2AP0DMW4 78 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 SMIM10L2BP0DMW5 78 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 ATN1P54259 1190 aaPredicted RBP9.1□□□□□ -0.95
SYNE1-211ENST00000413186 CALCOCO2Q13137 446 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 GRB14Q14449 540 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 PPP1R7Q15435 360 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 SREK1Q8WXA9 508 aaKnown RBP9.1□□□□□ -0.95
SYNE1-211ENST00000413186 AAASQ9NRG9 546 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 HYOU1Q9Y4L1 999 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 MAST2Q6P0Q8 1798 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 RPTORQ8N122 1335 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 A0A087X0B3 334 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 TTC26A0AVF1 554 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 ZC3H11AO75152 810 aaKnown RBP eCLIP9.1□□□□□ -0.95
SYNE1-211ENST00000413186 HLA-DRAP01903 254 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 SOX5P35711 763 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 RNASE9P60153 205 aaKnown RBP9.1□□□□□ -0.95
SYNE1-211ENST00000413186 IFRD2Q12894 506 aaPredicted RBP9.1□□□□□ -0.95
SYNE1-211ENST00000413186 OLFML2BQ68BL8 750 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 OR6B2Q6IFH4 312 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 SCYL2Q6P3W7 929 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 SLC27A1Q6PCB7 646 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 MAP4K3Q8IVH8 894 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 KSR1Q8IVT5 923 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 APPL2Q8NEU8 664 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 TRAPPC12Q8WVT3 735 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 PPP2R3CQ969Q6 453 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 GCNAQ96QF7 691 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 ERGIC2Q96RQ1 377 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 TXNRD2Q9NNW7 524 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 SLC12A6Q9UHW9 1150 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 Q9Y3F1 56 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 AKAP11Q9UKA4 1901 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 TADA2AO75478 443 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 MMP3P08254 477 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 RAG1P15918 1043 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 GNA15P30679 374 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 KRT81Q14533 505 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 HSDL1Q3SXM5 330 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 SGO2Q562F6 1265 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 C8orf74Q6P047 294 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 TOGARAM2Q6ZUX3 1019 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 ZNF365Q70YC5 407 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 NT5DC4Q86YG4 428 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 MMTAG2Q9BU76 263 aaKnown RBP9.1□□□□□ -0.95
SYNE1-211ENST00000413186 PDE11AQ9HCR9 933 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 CARNS1A5YM72 827 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 AOC2O75106 756 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 ELNP15502 786 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 PCSK1P29120 753 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 NR1I3Q14994 352 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 ELF2Q15723 593 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 IL17AQ16552 155 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 SLC35G1Q2M3R5 365 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 ZNF394Q53GI3 561 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 LMBRD2Q68DH5 695 aaPredicted RBP9.1□□□□□ -0.95
SYNE1-211ENST00000413186 PDXDC1Q6P996 788 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 MAATS1Q7Z4T9 603 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 FBF1Q8TES7 1133 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 RNF139Q8WU17 664 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 UBE2Q2Q8WVN8 375 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 TRIM62Q9BVG3 475 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 NIF3L1Q9GZT8 377 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 ADAM22Q9P0K1 906 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.1□□□□□ -0.95
SYNE1-211ENST00000413186 SNX9Q9Y5X1 595 aa9.1□□□□□ -0.95
SYNE1-211ENST00000413186 M0R2N6 131 aa9.09□□□□□ -0.95
SYNE1-211ENST00000413186 SART1O43290 800 aaKnown RBP9.09□□□□□ -0.95
SYNE1-211ENST00000413186 CCNE2O96020 404 aa9.09□□□□□ -0.95
SYNE1-211ENST00000413186 DACT3Q96B18 629 aaPredicted RBP9.09□□□□□ -0.95
SYNE1-211ENST00000413186 HHIPL1Q96JK4 782 aa9.09□□□□□ -0.95
SYNE1-211ENST00000413186 CCDC114Q96M63 670 aa9.09□□□□□ -0.95
SYNE1-211ENST00000413186 CGRRF1Q99675 332 aa9.09□□□□□ -0.95
SYNE1-211ENST00000413186 CBWD1Q9BRT8 395 aa9.09□□□□□ -0.95
SYNE1-211ENST00000413186 ASB7Q9H672 318 aa9.09□□□□□ -0.95
SYNE1-211ENST00000413186 PRDM10Q9NQV6 1147 aa9.09□□□□□ -0.95
SYNE1-211ENST00000413186 KANSL3Q9P2N6 904 aa9.09□□□□□ -0.95
SYNE1-211ENST00000413186 SATB2Q9UPW6 733 aa9.09□□□□□ -0.95
SYNE1-211ENST00000413186 GOLGB1Q14789 3259 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms