RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CXCL8P10145 99 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 UCHL3P15374 230 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 RFX1P22670 979 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 MSNP26038 577 aaKnown RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 AXLP30530 894 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 HNRNPH3P31942 346 aaKnown RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 THPOP40225 353 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 GRM5P41594 1212 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 KCNJ6P48051 423 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 POLR2FP61218 127 aaKnown RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 OSTNP61366 133 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 POU5F1Q01860 360 aaKnown RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 KYAT1Q16773 422 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 TRIM71Q2Q1W2 868 aaKnown RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 ZACNQ401N2 412 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 KLHDC7AQ5VTJ3 777 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 TDRD10Q5VZ19 366 aaKnown RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 E4F1Q66K89 784 aaPredicted RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 LMBRD2Q68DH5 695 aaPredicted RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 IQCEQ6IPM2 695 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 PDXDC1Q6P996 788 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 SLC27A1Q6PCB7 646 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 FBXO46Q6PJ61 603 aaPredicted RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 SV2AQ7L0J3 742 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 CACNA2D4Q7Z3S7 1137 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 APBB1IPQ7Z5R6 666 aaPredicted RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 FAM228AQ86W67 206 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 WDR49Q8IV35 697 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 TMEM192Q8IY95 271 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 THNSL1Q8IYQ7 743 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 FBXL13Q8NEE6 735 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 ZNF397Q8NF99 534 aaPredicted RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 OR8K1Q8NGG5 319 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 KIAA1524Q8TCG1 905 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 TAS1R2Q8TE23 839 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 VTI1AQ96AJ9 217 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 ZNF333Q96JL9 665 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 FAM84AQ96KN4 292 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 ADPGKQ9BRR6 497 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 EIF2AQ9BY44 585 aaKnown RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 SEZ6LQ9BYH1 1024 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 RNF208Q9H0X6 261 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 NLRC4Q9NPP4 1024 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 APEX2Q9UBZ4 518 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 AJAP1Q9UKB5 411 aaPredicted RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 PIN4Q9Y237 131 aaKnown RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 NOD1Q9Y239 953 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 COQ4Q9Y3A0 265 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 NOC2LQ9Y3T9 749 aaKnown RBP7.2□□□□□ -1.26
VPS41-204ENST00000413141 DAAM1Q9Y4D1 1078 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 CEP350Q5VT06 3117 aa7.2□□□□□ -1.26
VPS41-204ENST00000413141 TANC1Q9C0D5 1861 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 SOWAHDA6NJG2 315 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 F8VZ95 297 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 ARVCFO00192 962 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 TULP1O00294 542 aaPredicted RBP7.19□□□□□ -1.26
VPS41-204ENST00000413141 LRRN2O75325 713 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 IL18RAPO95256 599 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 CHRNA1P02708 482 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 C4BPAP04003 597 aaKnown RBP7.19□□□□□ -1.26
VPS41-204ENST00000413141 HSPA1AP0DMV8 641 aaKnown RBP7.19□□□□□ -1.26
VPS41-204ENST00000413141 HSPA1BP0DMV9 641 aaKnown RBP7.19□□□□□ -1.26
VPS41-204ENST00000413141 TNNI1P19237 187 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 PIK3CAP42336 1068 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 AP3M2P53677 418 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 JAM2P57087 298 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 CDK17Q00537 523 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 NCBP1Q09161 790 aaKnown RBP7.19□□□□□ -1.26
VPS41-204ENST00000413141 RAPGEF1Q13905 1077 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 SURF1Q15526 300 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 FAM26DQ5JW98 314 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 UBXN11Q5T124 520 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 PHLDB3Q6NSJ2 640 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 GJB7Q6PEY0 223 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 WDR59Q6PJI9 974 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 CYP26C1Q6V0L0 522 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 RAD9BQ6WBX8 426 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 RRAGAQ7L523 313 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 ARHGEF19Q8IW93 802 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 EFCAB13Q8IY85 973 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 EHBP1Q8NDI1 1231 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 OR5B17Q8NGF7 314 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 ZNF516Q92618 1163 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 SYN2Q92777 582 aaPredicted RBP7.19□□□□□ -1.26
VPS41-204ENST00000413141 SEMA4DQ92854 862 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 ARMC5Q96C12 935 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 CCDC94Q9BW85 323 aaPredicted RBP7.19□□□□□ -1.26
VPS41-204ENST00000413141 MTMR12Q9C0I1 747 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 CRISPLD2Q9H0B8 497 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 TRPV6Q9H1D0 765 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 NUCKS1Q9H1E3 243 aaKnown RBP7.19□□□□□ -1.26
VPS41-204ENST00000413141 NXF3Q9H4D5 531 aaKnown RBP7.19□□□□□ -1.26
VPS41-204ENST00000413141 RPF1Q9H9Y2 349 aaKnown RBP7.19□□□□□ -1.26
VPS41-204ENST00000413141 RAB20Q9NX57 234 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 MYO6Q9UM54 1294 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 PLAGL2Q9UPG8 496 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 MROH7Q68CQ1 1323 aa7.19□□□□□ -1.26
VPS41-204ENST00000413141 LACTBL1A8MY62 500 aa7.18□□□□□ -1.26
VPS41-204ENST00000413141 RBAK-RBAKDNI3L0D1 243 aa7.18□□□□□ -1.26
VPS41-204ENST00000413141 ZC3H11AO75152 810 aaKnown RBP eCLIP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms