RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 LDHAP00338 332 aaKnown RBP16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 THP07101 528 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 GALTP07902 379 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 KCNE1P15382 129 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 TNFSF9P41273 254 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 ALDH7A1P49419 539 aaKnown RBP16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 BCAR1P56945 870 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 ENOX2Q16206 610 aaKnown RBP16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 COBLL1Q53SF7 1204 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 ARMCX5Q6P1M9 558 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 CRELD2Q6UXH1 353 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 HS2ST1Q7LGA3 356 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 C12orf56Q8IXR9 622 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 COLGALT2Q8IYK4 626 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 FAM161BQ96MY7 647 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 ZNF558Q96NG5 402 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 FAM193BQ96PV7 902 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 PPP1R10Q96QC0 940 aaKnown RBP16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 TSPAN18Q96SJ8 248 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 C11orf84Q9BUA3 381 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 KCTD10Q9H3F6 313 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 CLSTN2Q9H4D0 955 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 DNAJB4Q9UDY4 337 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 PLAGL2Q9UPG8 496 aa16.82■□□□□ 0.28
TRAPPC12-203ENST00000411973 COL4A4P53420 1690 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC12-203ENST00000411973 SMIM28A0A1B0GU29 152 aa16.81■□□□□ 0.28
TRAPPC12-203ENST00000411973 PDXKO00764 312 aa16.81■□□□□ 0.28
TRAPPC12-203ENST00000411973 LPXNO60711 386 aa16.81■□□□□ 0.28
TRAPPC12-203ENST00000411973 ZC3H11AO75152 810 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRAPPC12-203ENST00000411973 CXCL8P10145 99 aa16.81■□□□□ 0.28
TRAPPC12-203ENST00000411973 PPM1AP35813 382 aa16.81■□□□□ 0.28
TRAPPC12-203ENST00000411973 ACOT2P49753 483 aa16.81■□□□□ 0.28
TRAPPC12-203ENST00000411973 GPT2Q8TD30 523 aa16.81■□□□□ 0.28
TRAPPC12-203ENST00000411973 GUCD1Q96NT3 240 aa16.81■□□□□ 0.28
TRAPPC12-203ENST00000411973 PRDM12Q9H4Q4 367 aa16.81■□□□□ 0.28
TRAPPC12-203ENST00000411973 RPF1Q9H9Y2 349 aaKnown RBP16.81■□□□□ 0.28
TRAPPC12-203ENST00000411973 MAN1B1Q9UKM7 699 aa16.81■□□□□ 0.28
TRAPPC12-203ENST00000411973 PLXNA4Q9HCM2 1894 aa16.81■□□□□ 0.28
TRAPPC12-203ENST00000411973 EXTL3O43909 919 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 ALDH2P05091 517 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 POU3F3P20264 500 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 MCM4P33991 863 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 PLCB3Q01970 1234 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 TUSC3Q13454 348 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 GPM6BQ13491 265 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 CAMK4Q16566 473 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 CD302Q8IX05 232 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 SLC39A11Q8N1S5 342 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 GPD1LQ8N335 351 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 KLHL23Q8NBE8 558 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 FBXL18Q96ME1 805 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 ZMAT2Q96NC0 199 aaKnown RBP16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 CDX2Q99626 313 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 PCIF1Q9H4Z3 704 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 KIAA1586Q9HCI6 787 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 SLC38A7Q9NVC3 462 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 SPG21Q9NZD8 308 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 HSPBP1Q9NZL4 362 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 KIAA1468Q9P260 1216 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 TRAF3IP3Q9Y228 551 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 MYO7AQ13402 2215 aa16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 PRRC2BQ5JSZ5 2229 aaKnown RBP16.8■□□□□ 0.28
TRAPPC12-203ENST00000411973 RFXAPO00287 272 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 FGF18O76093 207 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 MBD3O95983 291 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 ITGB1P05556 798 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 PBX3P40426 434 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 SLC11A1P49279 550 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 UBE3AQ05086 875 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 PPP2R3AQ06190 1150 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 MORC3Q14149 939 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 MYBPC2Q14324 1141 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 NFIL3Q16649 462 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 GLRA4Q5JXX5 417 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 SLC9A9Q8IVB4 645 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 SMYD4Q8IYR2 804 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 ZSWIM2Q8NEG5 633 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 SPPL3Q8TCT6 385 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 GDPD5Q8WTR4 605 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 SAAL1Q96ER3 474 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 IGSF21Q96ID5 467 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 FAM213AQ9BRX8 229 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 LMAN2LQ9H0V9 348 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 NUP62CLQ9H1M0 184 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 ASB7Q9H672 318 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 LMCD1Q9NZU5 365 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 MAPK8IP1Q9UQF2 711 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 LZTS1Q9Y250 596 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 FAN1Q9Y2M0 1017 aa16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC12-203ENST00000411973 LACTBL1A8MY62 500 aa16.78■□□□□ 0.28
TRAPPC12-203ENST00000411973 NRP1O14786 923 aa16.78■□□□□ 0.28
TRAPPC12-203ENST00000411973 CLIC2O15247 247 aa16.78■□□□□ 0.28
TRAPPC12-203ENST00000411973 IL18RAPO95256 599 aa16.78■□□□□ 0.28
TRAPPC12-203ENST00000411973 BMP6P22004 513 aa16.78■□□□□ 0.28
TRAPPC12-203ENST00000411973 PRCPP42785 496 aa16.78■□□□□ 0.28
TRAPPC12-203ENST00000411973 ADGRE1Q14246 886 aa16.78■□□□□ 0.28
TRAPPC12-203ENST00000411973 HSP90AA2PQ14568 343 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC12-203ENST00000411973 ZBTB6Q15916 424 aa16.78■□□□□ 0.28
TRAPPC12-203ENST00000411973 BRSK2Q8IWQ3 736 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms