RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 PRPF40AO75400 957 aaKnown RBP24.41■■□□□ 1.5
PTCD3-203ENST00000409783 RHOBTB3O94955 611 aa24.41■■□□□ 1.5
PTCD3-203ENST00000409783 CLTAP09496 248 aa24.41■■□□□ 1.5
PTCD3-203ENST00000409783 PPM1AP35813 382 aa24.41■■□□□ 1.5
PTCD3-203ENST00000409783 UBE2HP62256 183 aa24.41■■□□□ 1.5
PTCD3-203ENST00000409783 PSMD2Q13200 908 aa24.41■■□□□ 1.5
PTCD3-203ENST00000409783 PNOCQ13519 176 aa24.41■■□□□ 1.5
PTCD3-203ENST00000409783 ZMAT2Q96NC0 199 aaKnown RBP24.41■■□□□ 1.5
PTCD3-203ENST00000409783 FAM193BQ96PV7 902 aaPredicted RBP24.41■■□□□ 1.5
PTCD3-203ENST00000409783 TOPORSQ9NS56 1045 aaPredicted RBP24.41■■□□□ 1.5
PTCD3-203ENST00000409783 CNTN3Q9P232 1028 aa24.41■■□□□ 1.5
PTCD3-203ENST00000409783 CPSF3Q9UKF6 684 aaKnown RBP24.41■■□□□ 1.5
PTCD3-203ENST00000409783 UBE4BO95155 1302 aa24.4■■□□□ 1.5
PTCD3-203ENST00000409783 SMIM28A0A1B0GU29 152 aa24.4■■□□□ 1.5
PTCD3-203ENST00000409783 NRP1O14786 923 aa24.4■■□□□ 1.5
PTCD3-203ENST00000409783 TGFB1I1O43294 461 aa24.4■■□□□ 1.5
PTCD3-203ENST00000409783 THP07101 528 aa24.4■■□□□ 1.5
PTCD3-203ENST00000409783 ADRB2P07550 413 aa24.4■■□□□ 1.5
PTCD3-203ENST00000409783 KCNE1P15382 129 aa24.4■■□□□ 1.5
PTCD3-203ENST00000409783 YARSP54577 528 aaKnown RBP24.4■■□□□ 1.5
PTCD3-203ENST00000409783 UBE3AQ05086 875 aa24.4■■□□□ 1.5
PTCD3-203ENST00000409783 GLRA4Q5JXX5 417 aa24.4■■□□□ 1.5
PTCD3-203ENST00000409783 ELOA2Q8IYF1 753 aaPredicted RBP24.4■■□□□ 1.5
PTCD3-203ENST00000409783 SYCP3Q8IZU3 236 aa24.4■■□□□ 1.5
PTCD3-203ENST00000409783 POF1BQ8WVV4 589 aa24.4■■□□□ 1.5
PTCD3-203ENST00000409783 IGSF21Q96ID5 467 aa24.4■■□□□ 1.5
PTCD3-203ENST00000409783 MARCH5Q9NX47 278 aa24.4■■□□□ 1.5
PTCD3-203ENST00000409783 LZTS1Q9Y250 596 aa24.4■■□□□ 1.5
PTCD3-203ENST00000409783 TTC26A0AVF1 554 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 CARNS1A5YM72 827 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 ALDH2P05091 517 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 CXCL8P10145 99 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 GARTP22102 1010 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 TUSC3Q13454 348 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 KCNB1Q14721 858 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 ENOX2Q16206 610 aaKnown RBP24.39■■□□□ 1.49
PTCD3-203ENST00000409783 KYAT1Q16773 422 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 CRELD2Q6UXH1 353 aaPredicted RBP24.39■■□□□ 1.49
PTCD3-203ENST00000409783 ZSWIM2Q8NEG5 633 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 SPATA20Q8TB22 786 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 POMGNT1Q8WZA1 660 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 CBWD1Q9BRT8 395 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 CACNG4Q9UBN1 327 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 AGO2Q9UKV8 859 aaKnown RBP24.39■■□□□ 1.49
PTCD3-203ENST00000409783 FAN1Q9Y2M0 1017 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 REV3LO60673 3130 aa24.39■■□□□ 1.49
PTCD3-203ENST00000409783 F8W810 466 aa24.38■■□□□ 1.49
PTCD3-203ENST00000409783 SLC34A2O95436 690 aa24.38■■□□□ 1.49
PTCD3-203ENST00000409783 EFEMP2O95967 443 aa24.38■■□□□ 1.49
PTCD3-203ENST00000409783 PTPROQ16827 1216 aa24.38■■□□□ 1.49
PTCD3-203ENST00000409783 CCDC34Q96HJ3 373 aa24.38■■□□□ 1.49
PTCD3-203ENST00000409783 PAAF1Q9BRP4 392 aa24.38■■□□□ 1.49
PTCD3-203ENST00000409783 VN1R3Q9BXE9 311 aa24.38■■□□□ 1.49
PTCD3-203ENST00000409783 PLEKHA5Q9HAU0 1116 aa24.38■■□□□ 1.49
PTCD3-203ENST00000409783 COL6A3P12111 3177 aa24.37■■□□□ 1.49
PTCD3-203ENST00000409783 IRS1P35568 1242 aa24.37■■□□□ 1.49
PTCD3-203ENST00000409783 OR1G1P47890 313 aa24.37■■□□□ 1.49
PTCD3-203ENST00000409783 ACOT2P49753 483 aa24.37■■□□□ 1.49
PTCD3-203ENST00000409783 ERVFC1P60507 584 aa24.37■■□□□ 1.49
PTCD3-203ENST00000409783 SOX4Q06945 474 aaPredicted RBP24.37■■□□□ 1.49
PTCD3-203ENST00000409783 NELFCDQ8IXH7 590 aa24.37■■□□□ 1.49
PTCD3-203ENST00000409783 MAFAQ8NHW3 353 aaPredicted RBP24.37■■□□□ 1.49
PTCD3-203ENST00000409783 EYSQ5T1H1 3165 aa24.36■■□□□ 1.49
PTCD3-203ENST00000409783 LACTBL1A8MY62 500 aa24.36■■□□□ 1.49
PTCD3-203ENST00000409783 FSCN2O14926 492 aa24.36■■□□□ 1.49
PTCD3-203ENST00000409783 KINO60870 393 aaKnown RBP24.36■■□□□ 1.49
PTCD3-203ENST00000409783 KNOP1Q1ED39 458 aaKnown RBP24.36■■□□□ 1.49
PTCD3-203ENST00000409783 RABGGTAQ92696 567 aa24.36■■□□□ 1.49
PTCD3-203ENST00000409783 ERCC4Q92889 916 aaPredicted RBP24.36■■□□□ 1.49
PTCD3-203ENST00000409783 TMEM169Q96HH4 297 aa24.36■■□□□ 1.49
PTCD3-203ENST00000409783 RPF1Q9H9Y2 349 aaKnown RBP24.36■■□□□ 1.49
PTCD3-203ENST00000409783 LMBRD1Q9NUN5 540 aa24.36■■□□□ 1.49
PTCD3-203ENST00000409783 PRG3Q9Y2Y8 225 aaPredicted RBP24.36■■□□□ 1.49
PTCD3-203ENST00000409783 PCDHA5Q9Y5H7 936 aa24.36■■□□□ 1.49
PTCD3-203ENST00000409783 CASTOR2A6NHX0 329 aa24.35■■□□□ 1.49
PTCD3-203ENST00000409783 POU5F1Q01860 360 aaKnown RBP24.35■■□□□ 1.49
PTCD3-203ENST00000409783 KRT17Q04695 432 aa24.35■■□□□ 1.49
PTCD3-203ENST00000409783 ZBTB6Q15916 424 aa24.35■■□□□ 1.49
PTCD3-203ENST00000409783 DDX53Q86TM3 631 aaKnown RBP24.35■■□□□ 1.49
PTCD3-203ENST00000409783 SAAL1Q96ER3 474 aa24.35■■□□□ 1.49
PTCD3-203ENST00000409783 PCIF1Q9H4Z3 704 aa24.35■■□□□ 1.49
PTCD3-203ENST00000409783 GOLGA2P5Q9HBQ8 144 aa24.35■■□□□ 1.49
PTCD3-203ENST00000409783 TLR9Q9NR96 1032 aa24.35■■□□□ 1.49
PTCD3-203ENST00000409783 AGPAT3Q9NRZ7 376 aa24.35■■□□□ 1.49
PTCD3-203ENST00000409783 PCDHGC5Q9Y5F6 944 aa24.35■■□□□ 1.49
PTCD3-203ENST00000409783 IGFBP6P24592 240 aaPredicted RBP24.34■■□□□ 1.49
PTCD3-203ENST00000409783 ARMCX5Q6P1M9 558 aa24.34■■□□□ 1.49
PTCD3-203ENST00000409783 RNF168Q8IYW5 571 aaPredicted RBP24.34■■□□□ 1.49
PTCD3-203ENST00000409783 CCDC47Q96A33 483 aaKnown RBP24.34■■□□□ 1.49
PTCD3-203ENST00000409783 C18orf25Q96B23 403 aaPredicted RBP24.34■■□□□ 1.49
PTCD3-203ENST00000409783 GSDMAQ96QA5 445 aa24.34■■□□□ 1.49
PTCD3-203ENST00000409783 KCTD10Q9H3F6 313 aa24.34■■□□□ 1.49
PTCD3-203ENST00000409783 PUF60Q9UHX1 559 aaKnown RBP24.34■■□□□ 1.49
PTCD3-203ENST00000409783 EXTL3O43909 919 aa24.33■■□□□ 1.49
PTCD3-203ENST00000409783 CSPG5O95196 566 aa24.33■■□□□ 1.49
PTCD3-203ENST00000409783 WNT7BP56706 349 aa24.33■■□□□ 1.49
PTCD3-203ENST00000409783 SNRPFP62306 86 aaKnown RBP24.33■■□□□ 1.49
PTCD3-203ENST00000409783 PPP2R3AQ06190 1150 aa24.33■■□□□ 1.49
PTCD3-203ENST00000409783 SPAG1Q07617 926 aa24.33■■□□□ 1.49
PTCD3-203ENST00000409783 HSP90AA2PQ14568 343 aaPredicted RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms