RNA–Protein interactions for RNA: ENST00000407004.7

ILF3-202, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-202ENST00000407004 PCDHA13Q9Y5I0 950 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 EDIL3O43854 480 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 MAGEA1P43355 309 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 NR5A1Q13285 461 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 DYNC1I2Q13409 638 aaKnown RBP12.89□□□□□ -0.35
ILF3-202ENST00000407004 NONOQ15233 471 aaKnown RBP eCLIP12.89□□□□□ -0.357e-7■■□□□ 14
ILF3-202ENST00000407004 GSDMAQ96QA5 445 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 SENP7Q9BQF6 1050 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 ADAM22Q9P0K1 906 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 SYNGAP1Q96PV0 1343 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 ANKRD62A6NC57 917 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 SHBGP04278 402 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 NLRP5P59047 1200 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 NCALDP61601 193 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 RETREG2Q8NC44 543 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 ZFAND2BQ8WV99 257 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 TRIM47Q96LD4 638 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 PREBQ9HCU5 417 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 MYH10P35580 1976 aa12.89□□□□□ -0.35
ILF3-202ENST00000407004 RAD51CO43502 376 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 CEP104O60308 925 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 FTCDO95954 541 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 CHN1P15882 459 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 TNFRSF8P28908 595 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 SLC16A2P36021 539 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 PSMC1P62191 440 aaKnown RBP12.88□□□□□ -0.35
ILF3-202ENST00000407004 CCSAPQ6IQ19 270 aaPredicted RBP12.88□□□□□ -0.35
ILF3-202ENST00000407004 MREGQ8N565 214 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 RNF10Q8N5U6 811 aaKnown RBP12.88□□□□□ -0.35
ILF3-202ENST00000407004 SNRNP27Q8WVK2 155 aaKnown RBP12.88□□□□□ -0.35
ILF3-202ENST00000407004 DDX23Q9BUQ8 820 aaKnown RBP12.88□□□□□ -0.35
ILF3-202ENST00000407004 FBXO28Q9NVF7 368 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 CYP39A1Q9NYL5 469 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 PACSIN2Q9UNF0 486 aaPredicted RBP12.88□□□□□ -0.35
ILF3-202ENST00000407004 FZD1Q9UP38 647 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 NFASCO94856 1347 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 A0A087X0B3 334 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 DESP17661 470 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 NFKBIAP25963 317 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 HSPA9P38646 679 aaKnown RBP12.88□□□□□ -0.35
ILF3-202ENST00000407004 TOB1P50616 345 aaPredicted RBP12.88□□□□□ -0.35
ILF3-202ENST00000407004 KCNA1Q09470 495 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 PTPROQ16827 1216 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 ZNF792Q3KQV3 632 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.88□□□□□ -0.35
ILF3-202ENST00000407004 RASIP1Q5U651 963 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 HEATR3Q7Z4Q2 680 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 MIPOL1Q8TD10 442 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 SOCS4Q8WXH5 440 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 MOV10L1Q9BXT6 1211 aaKnown RBP12.88□□□□□ -0.35
ILF3-202ENST00000407004 ZMYND8Q9ULU4 1186 aaPredicted RBP12.88□□□□□ -0.35
ILF3-202ENST00000407004 UBIAD1Q9Y5Z9 338 aa12.88□□□□□ -0.35
ILF3-202ENST00000407004 B3GALNT1O75752 331 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 STAT6P42226 847 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 ATP2C1P98194 919 aaPredicted RBP12.87□□□□□ -0.35
ILF3-202ENST00000407004 LRP8Q14114 963 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 MUM1Q2TAK8 710 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 B3GNT9Q6UX72 402 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 CCDC84Q86UT8 332 aaPredicted RBP12.87□□□□□ -0.35
ILF3-202ENST00000407004 SYTL5Q8TDW5 730 aaPredicted RBP12.87□□□□□ -0.35
ILF3-202ENST00000407004 VMP1Q96GC9 406 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 CAPNS2Q96L46 248 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 GDAQ9Y2T3 454 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 USH1CQ9Y6N9 552 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 NPTXRO95502 500 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 XRCC5P13010 732 aaKnown RBP12.87□□□□□ -0.35
ILF3-202ENST00000407004 TNNC1P63316 161 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 PACS1Q6VY07 963 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 RDM1Q8NG50 284 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 SYMPKQ92797 1274 aaKnown RBP12.87□□□□□ -0.35
ILF3-202ENST00000407004 FERMT2Q96AC1 680 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 KCNMB3Q9NPA1 279 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 INTS9Q9NV88 658 aaKnown RBP12.87□□□□□ -0.35
ILF3-202ENST00000407004 ZNF263O14978 683 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 HSPA6P17066 643 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 RRM1P23921 792 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 POLR2FP61218 127 aaKnown RBP12.87□□□□□ -0.35
ILF3-202ENST00000407004 LRIG3Q6UXM1 1119 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 KIFAP3Q92845 792 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 GPRASP2Q96D09 838 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 MTMR9Q96QG7 549 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 SRPK1Q96SB4 655 aaKnown RBP12.87□□□□□ -0.35
ILF3-202ENST00000407004 MPHOSPH6Q99547 160 aaKnown RBP12.87□□□□□ -0.35
ILF3-202ENST00000407004 FAM129AQ9BZQ8 928 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 TRIM31Q9BZY9 425 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 NSRP1Q9H0G5 558 aaKnown RBP12.87□□□□□ -0.35
ILF3-202ENST00000407004 RNF146Q9NTX7 359 aa12.87□□□□□ -0.35
ILF3-202ENST00000407004 LGALS16A8MUM7 142 aa12.86□□□□□ -0.35
ILF3-202ENST00000407004 CETN3O15182 167 aa12.86□□□□□ -0.35
ILF3-202ENST00000407004 FXR2P51116 673 aaKnown RBP eCLIP12.86□□□□□ -0.352e-10■■□□□ 11.9
ILF3-202ENST00000407004 C10orf62Q5T681 223 aaPredicted RBP12.86□□□□□ -0.35
ILF3-202ENST00000407004 NEK8Q86SG6 692 aa12.86□□□□□ -0.35
ILF3-202ENST00000407004 CCDC155Q8N6L0 562 aa12.86□□□□□ -0.35
ILF3-202ENST00000407004 AK8Q96MA6 479 aa12.86□□□□□ -0.35
ILF3-202ENST00000407004 PYM1Q9BRP8 204 aaKnown RBP12.86□□□□□ -0.35
ILF3-202ENST00000407004 TLR10Q9BXR5 811 aa12.86□□□□□ -0.35
ILF3-202ENST00000407004 ANO3Q9BYT9 981 aa12.86□□□□□ -0.35
ILF3-202ENST00000407004 SCOCQ9UIL1 159 aa12.86□□□□□ -0.35
ILF3-202ENST00000407004 RWDD2AQ9UIY3 292 aa12.86□□□□□ -0.35
ILF3-202ENST00000407004 SRPRBQ9Y5M8 271 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms