RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 LRFN3Q9BTN0 628 aa5□□□□□ -1.61
C1GALT1-202ENST00000402468 CHMP4AQ9BY43 222 aa5□□□□□ -1.61
C1GALT1-202ENST00000402468 EPC1Q9H2F5 836 aa5□□□□□ -1.61
C1GALT1-202ENST00000402468 TPCN1Q9ULQ1 816 aa5□□□□□ -1.61
C1GALT1-202ENST00000402468 SIK3Q9Y2K2 1263 aa5□□□□□ -1.61
C1GALT1-202ENST00000402468 RIPOR2Q9Y4F9 1068 aa5□□□□□ -1.61
C1GALT1-202ENST00000402468 PCDHA3Q9Y5H8 950 aa5□□□□□ -1.61
C1GALT1-202ENST00000402468 A0A1B0GTL3 188 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 PMS2P1A4D2B8 440 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 NPIPB6E9PJ23 425 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 FOXN3O00409 490 aaPredicted RBP4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 PHGDHO43175 533 aaKnown RBP4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 ADCY6O43306 1168 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 SLC26A4O43511 780 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 FRS3O43559 492 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 SASH1O94885 1247 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 RAP2AP10114 183 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 TYRP14679 529 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 MALP21145 153 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 FLT3LGP49771 235 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 CTXN1P60606 82 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 RAC3P60763 192 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 APBA1Q02410 837 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 TLE1Q04724 770 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 SEMA5AQ13591 1074 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 MORC3Q14149 939 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 SURF1Q15526 300 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 ZNF572Q7Z3I7 529 aaPredicted RBP4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 EXOC8Q8IYI6 725 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 TRMT2AQ8IZ69 625 aaKnown RBP4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 ZDHHC14Q8IZN3 488 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 IFI44Q8TCB0 444 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 IL17RAQ96F46 866 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 STRBPQ96SI9 672 aaKnown RBP4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 MYD88Q99836 296 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 C12orf65Q9H3J6 166 aaKnown RBP4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 ARMT1Q9H993 441 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 CHST12Q9NRB3 414 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 PHTF1Q9UMS5 762 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 PCDHGB6Q9Y5F9 930 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 SLC4A7Q9Y6M7 1214 aa4.99□□□□□ -1.61
C1GALT1-202ENST00000402468 ADAMTS20P59510 1910 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 A0A1W2PRX2 142 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 KRTAP9-7A8MTY7 169 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 LDHAP00338 332 aaKnown RBP4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 KRT1P04264 644 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 GNAI3P08754 354 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 MTHFD1P11586 935 aaKnown RBP4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 GUCY1A2P33402 732 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 CASRP41180 1078 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 KCNC1P48547 511 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 GNAI1P63096 354 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 NKX6-1P78426 367 aaPredicted RBP4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 HGFACQ04756 655 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 MTM1Q13496 603 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 FAM47AQ5JRC9 791 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 PRAMEF14Q5SWL7 426 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 SMC5Q8IY18 1101 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 FAM186BQ8IYM0 893 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 ADGRG2Q8IZP9 1017 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 LGI4Q8N135 537 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 KRT78Q8N1N4 520 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 SH2D3CQ8N5H7 860 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 AOPEPQ8N6M6 819 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 MDM1Q8TC05 714 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 GJA10Q969M2 543 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 RAB24Q969Q5 203 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 SUCLG2Q96I99 432 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 TCF25Q9BQ70 676 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 BTBD1Q9H0C5 482 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 C11orf54Q9H0W9 315 aaPredicted RBP4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 BHMT2Q9H2M3 363 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 LDAHQ9H6V9 325 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 IL23AQ9NPF7 189 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 NLRC4Q9NPP4 1024 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 KLHL11Q9NVR0 708 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 SIDT1Q9NXL6 827 aaKnown RBP4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 SNX13Q9Y5W8 968 aa4.98□□□□□ -1.61
C1GALT1-202ENST00000402468 LRRC14BA6NHZ5 514 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 B4GALT4O60513 344 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 AMY1AP04745 511 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 SNRPA1P09661 255 aaKnown RBP4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 HTR3AP46098 478 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 SLURP1P55000 103 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 ZNF280AP59817 542 aaPredicted RBP4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 BTKQ06187 659 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 PLS1Q14651 629 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 LONRF1Q17RB8 773 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 FLYWCH1Q4VC44 716 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 ARHGEF18Q6ZSZ5 1173 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 MORC1Q86VD1 984 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 SP8Q8IXZ3 490 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 LILRA3Q8N6C8 439 aaPredicted RBP4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 SHCBP1Q8NEM2 672 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 NLGN4YQ8NFZ3 816 aaPredicted RBP4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 MBD6Q96DN6 1003 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 APIPQ96GX9 242 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 NELFAQ9H3P2 528 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 KIAA1586Q9HCI6 787 aa4.97□□□□□ -1.61
C1GALT1-202ENST00000402468 USP40Q9NVE5 1235 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms