RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 CRELD2Q6UXH1 353 aaPredicted RBP11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 ZNF280BQ86YH2 543 aa11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 NELFCDQ8IXH7 590 aa11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 COLGALT2Q8IYK4 626 aa11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 GUF1Q8N442 669 aaKnown RBP11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 DEFB123Q8N688 67 aa11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 GPT2Q8TD30 523 aa11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 PPP1R10Q96QC0 940 aaKnown RBP11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 RPS6KC1Q96S38 1066 aa11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 TSPAN18Q96SJ8 248 aa11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 CBWD1Q9BRT8 395 aa11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 CDH23Q9H251 3354 aa11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 CLSTN2Q9H4D0 955 aa11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 AGPAT3Q9NRZ7 376 aa11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 DNAJB4Q9UDY4 337 aa11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 PLAGL2Q9UPG8 496 aa11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 VWA8A3KMH1 1905 aa11.39□□□□□ -0.59
CYCSP55-201ENST00000399027 SMIM28A0A1B0GU29 152 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 PDXKO00764 312 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 LPXNO60711 386 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 THP07101 528 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 GALTP07902 379 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 CXCL8P10145 99 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 POU3F3P20264 500 aaPredicted RBP11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 CTNNB1P35222 781 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 BCAR1P56945 870 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 PLCB3Q01970 1234 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 RNASELQ05823 741 aaKnown RBP11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 ENOX2Q16206 610 aaKnown RBP11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 NFIL3Q16649 462 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 KCNT2Q6UVM3 1135 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 Q7L0L9 218 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 CD302Q8IX05 232 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 SLC39A11Q8N1S5 342 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 GPD1LQ8N335 351 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 FBXO22Q8NEZ5 403 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 GOLGA5Q8TBA6 731 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 ARNTL2Q8WYA1 636 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 SPOCK2Q92563 424 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 FBXL18Q96ME1 805 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 ZNF558Q96NG5 402 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 C11orf84Q9BUA3 381 aaPredicted RBP11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 CERS4Q9HA82 394 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 MTMR10Q9NXD2 777 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 KIAA1468Q9P260 1216 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 MAN1B1Q9UKM7 699 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 TRAF3IP3Q9Y228 551 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 PCDHB12Q9Y5F1 795 aa11.38□□□□□ -0.59
CYCSP55-201ENST00000399027 TSC2P49815 1807 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 EXTL3O43909 919 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 ZC3H11AO75152 810 aaKnown RBP eCLIP11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 MBD3O95983 291 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 MCM4P33991 863 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 PPM1AP35813 382 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 PRCPP42785 496 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 SLC11A1P49279 550 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 ALDH7A1P49419 539 aaKnown RBP11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 ACOT2P49753 483 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 PPP2R3AQ06190 1150 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 TUSC3Q13454 348 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 MORC3Q14149 939 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 MYBPC2Q14324 1141 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 ZBTB6Q15916 424 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 CAMK4Q16566 473 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 ZCWPW2Q504Y3 356 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 SPOUT1Q5T280 376 aaKnown RBP11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 HS2ST1Q7LGA3 356 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 SLC9A9Q8IVB4 645 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 TRIML1Q8N9V2 468 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 KLHL23Q8NBE8 558 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 ZSWIM2Q8NEG5 633 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 FAM161BQ96MY7 647 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 ZMAT2Q96NC0 199 aaKnown RBP11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 GUCD1Q96NT3 240 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 FAM193BQ96PV7 902 aaPredicted RBP11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 NUP62CLQ9H1M0 184 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 PRDM12Q9H4Q4 367 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 ASB7Q9H672 318 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 RPF1Q9H9Y2 349 aaKnown RBP11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 KIAA1586Q9HCI6 787 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 SLC38A7Q9NVC3 462 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 DMAC2Q9NW81 257 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 HSPBP1Q9NZL4 362 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 MTUS1Q9ULD2 1270 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 LZTS1Q9Y250 596 aa11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.37□□□□□ -0.59
CYCSP55-201ENST00000399027 LACTBL1A8MY62 500 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 NRP1O14786 923 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 CLIC2O15247 247 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 CALUO43852 315 aaPredicted RBP11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 FGF18O76093 207 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 IL18RAPO95256 599 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 EFEMP2O95967 443 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 ALDH2P05091 517 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 ITGB1P05556 798 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 BMP6P22004 513 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 PPP1R2P41236 205 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 UBE3AQ05086 875 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 GPM6BQ13491 265 aa11.36□□□□□ -0.59
CYCSP55-201ENST00000399027 HSP90AA2PQ14568 343 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms