RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ROPN1BQ9BZX4 212 aaPredicted RBP15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 ROPN1Q9HAT0 212 aaPredicted RBP15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 CYP4F11Q9HBI6 524 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 METTL5Q9NRN9 209 aaKnown RBP15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 SUCLA2Q9P2R7 463 aaPredicted RBP15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 CNOT8Q9UFF9 292 aaKnown RBP15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 DENND3A2RUS2 1198 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 MAGEA13PA6NCF6 341 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 CFLARO15519 480 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 SMARCA1P28370 1054 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 PASD1Q8IV76 773 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 RTKN2Q8IZC4 609 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 LRGUKQ96M69 825 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 PPP1R16BQ96T49 567 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 DDX4Q9NQI0 724 aaKnown RBP15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 IVNS1ABPQ9Y6Y0 642 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 DDTLA6NHG4 134 aaPredicted RBP15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 P4HBP07237 508 aaKnown RBP15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 ACADSP16219 412 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 RFC5P40937 340 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 ECE1P42892 770 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 CAV1Q03135 178 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 STAT4Q14765 748 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 IZUMO3Q5VZ72 239 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 CENPPQ6IPU0 288 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 CD302Q8IX05 232 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 TTC16Q8NEE8 873 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 PAIP2BQ9ULR5 123 aaKnown RBP15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 SLIT3O75094 1523 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 ATP4AP20648 1035 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 PBX1P40424 430 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 CPA2P48052 419 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 PHEXP78562 749 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 IL17AQ16552 155 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 MFN1Q8IWA4 741 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 ZNF564Q8TBZ8 553 aaPredicted RBP15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 ACER1Q8TDN7 264 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 PPWD1Q96BP3 646 aaKnown RBP15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 DUSP9Q99956 384 aaKnown RBP15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 FAM213AQ9BRX8 229 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 OSBPL7Q9BZF2 842 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 DCLRE1BQ9H816 532 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 KCNG1Q9UIX4 513 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 C2CD2Q9Y426 696 aa15.48■□□□□ 0.07
RPRD1A-202ENST00000399022 K7ERI5 159 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 RPA1P27694 616 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 MAPK7Q13164 816 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 ZNF668Q96K58 619 aaPredicted RBP15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 RIOX1Q9H6W3 641 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 PDP2Q9P2J9 529 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 HERC5Q9UII4 1024 aaKnown RBP15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 H0YCG3 227 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 SOX5P35711 763 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 HAUS6Q7Z4H7 955 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 RXFP1Q9HBX9 757 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 NRBP2Q9NSY0 501 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 RNF146Q9NTX7 359 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 FEM1BQ9UK73 627 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 KRT1P04264 644 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 ENO1P06733 434 aaKnown RBP15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 SRGAP2CP0DJJ0 459 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 BPIFB4P59827 614 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 THOC5Q13769 683 aaKnown RBP15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 LMBRD2Q68DH5 695 aaPredicted RBP15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 ARHGAP27Q6ZUM4 889 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 PDIK1LQ8N165 341 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 ACTRT1Q8TDG2 376 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 NUP85Q9BW27 656 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 CHORDC1Q9UHD1 332 aaPredicted RBP15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 ALG6Q9Y672 507 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 ZHX2Q9Y6X8 837 aa15.47■□□□□ 0.07
RPRD1A-202ENST00000399022 WDR64B1ANS9 1081 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 GSTA2P09210 222 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 CCND2P30279 289 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 CACNA2D1P54289 1103 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 FUT2Q10981 343 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 MMEL1Q495T6 779 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 SCARA5Q6ZMJ2 495 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 CRLF3Q8IUI8 442 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 ZBED8Q8IZ13 594 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 TRIM56Q9BRZ2 755 aaKnown RBP15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 GABBR1Q9UBS5 961 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 MRC1P22897 1456 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 CLDN3O15551 220 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 DRD4P21917 467 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 SSTR3P32745 418 aaPredicted RBP15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 CCDC14Q49A88 953 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 SNRNP48Q6IEG0 339 aaKnown RBP15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 KCNK18Q7Z418 384 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 PRMT6Q96LA8 375 aaPredicted RBP15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 TMEM237Q96Q45 408 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 SCINQ9Y6U3 715 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 PECAM1P16284 738 aaPredicted RBP15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 ARL1P40616 181 aaPredicted RBP15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 CASP4P49662 377 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 EPHA7Q15375 998 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 RNF25Q96BH1 459 aaPredicted RBP15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 C18orf8Q96DM3 657 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 THTPAQ9BU02 230 aa15.46■□□□□ 0.07
RPRD1A-202ENST00000399022 TMEM39BQ9GZU3 492 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms