RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 MTCH2Q9Y6C9 303 aa17.21■□□□□ 0.35
MBD1-207ENST00000398488 TDRD15B5MCY1 1934 aaKnown RBP17.21■□□□□ 0.35
MBD1-207ENST00000398488 ATG2AQ2TAZ0 1938 aa17.21■□□□□ 0.35
MBD1-207ENST00000398488 GOLGA8IPA6NC78 632 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 GOLGA8JA6NMD2 632 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 FGF18O76093 207 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 RB1P06400 928 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 IGFBP4P22692 258 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 ABCD1P33897 745 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 KCNB1Q14721 858 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 POMGNT1Q8WZA1 660 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 P2RX5Q93086 422 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 ZNF558Q96NG5 402 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 PLVAPQ9BX97 442 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 TMEM206Q9H813 350 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 GOLGA2P5Q9HBQ8 144 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 MARCH5Q9NX47 278 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 KANSL3Q9P2N6 904 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 AGO2Q9UKV8 859 aaKnown RBP17.21■□□□□ 0.34
MBD1-207ENST00000398488 EXOC7Q9UPT5 735 aa17.21■□□□□ 0.34
MBD1-207ENST00000398488 TTC26A0AVF1 554 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 LACTBL1A8MY62 500 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 NRP1O14786 923 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 CLIC2O15247 247 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 KINO60870 393 aaKnown RBP17.2■□□□□ 0.34
MBD1-207ENST00000398488 CLTAP09496 248 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 IRS1P35568 1242 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 GRIK3Q13003 919 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 PSMD2Q13200 908 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 ISM2Q6H9L7 571 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 APBB1IPQ7Z5R6 666 aaPredicted RBP17.2■□□□□ 0.34
MBD1-207ENST00000398488 C18orf25Q96B23 403 aaPredicted RBP17.2■□□□□ 0.34
MBD1-207ENST00000398488 FAM84AQ96KN4 292 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 RPS6KC1Q96S38 1066 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 KCTD10Q9H3F6 313 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 AGPAT3Q9NRZ7 376 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 CNTN3Q9P232 1028 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 PRG3Q9Y2Y8 225 aaPredicted RBP17.2■□□□□ 0.34
MBD1-207ENST00000398488 RWDD3Q9Y3V2 267 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 PCDHB12Q9Y5F1 795 aa17.2■□□□□ 0.34
MBD1-207ENST00000398488 MYO7AQ13402 2215 aa17.19■□□□□ 0.34
MBD1-207ENST00000398488 PRRC2BQ5JSZ5 2229 aaKnown RBP17.19■□□□□ 0.34
MBD1-207ENST00000398488 CASTOR2A6NHX0 329 aa17.19■□□□□ 0.34
MBD1-207ENST00000398488 BMP6P22004 513 aa17.19■□□□□ 0.34
MBD1-207ENST00000398488 ERVFC1P60507 584 aa17.19■□□□□ 0.34
MBD1-207ENST00000398488 CAMK4Q16566 473 aa17.19■□□□□ 0.34
MBD1-207ENST00000398488 KNOP1Q1ED39 458 aaKnown RBP17.19■□□□□ 0.34
MBD1-207ENST00000398488 SLFN12LQ6IEE8 588 aa17.19■□□□□ 0.34
MBD1-207ENST00000398488 CD300LGQ6UXG3 332 aa17.19■□□□□ 0.34
MBD1-207ENST00000398488 ELOA2Q8IYF1 753 aaPredicted RBP17.19■□□□□ 0.34
MBD1-207ENST00000398488 GPT2Q8TD30 523 aa17.19■□□□□ 0.34
MBD1-207ENST00000398488 POF1BQ8WVV4 589 aa17.19■□□□□ 0.34
MBD1-207ENST00000398488 FAM213AQ9BRX8 229 aa17.19■□□□□ 0.34
MBD1-207ENST00000398488 C11orf84Q9BUA3 381 aaPredicted RBP17.19■□□□□ 0.34
MBD1-207ENST00000398488 AAASQ9NRG9 546 aa17.19■□□□□ 0.34
MBD1-207ENST00000398488 SPG21Q9NZD8 308 aa17.19■□□□□ 0.34
MBD1-207ENST00000398488 UBE4BO95155 1302 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 CITO14578 2027 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 THP07101 528 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 ADRB2P07550 413 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 KCNE1P15382 129 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 FOSL2P15408 326 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 POU3F3P20264 500 aaPredicted RBP17.18■□□□□ 0.34
MBD1-207ENST00000398488 GARTP22102 1010 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 OR1G1P47890 313 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 ALDH7A1P49419 539 aaKnown RBP17.18■□□□□ 0.34
MBD1-207ENST00000398488 GUCY2FP51841 1108 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 YARSP54577 528 aaKnown RBP17.18■□□□□ 0.34
MBD1-207ENST00000398488 SCARA3Q6AZY7 606 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 STXBP4Q6ZWJ1 553 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 TAS1R1Q7RTX1 841 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 RSPH1Q8WYR4 309 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 IGSF21Q96ID5 467 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 GBP4Q96PP9 640 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 FAM193BQ96PV7 902 aaPredicted RBP17.18■□□□□ 0.34
MBD1-207ENST00000398488 TMEM175Q9BSA9 504 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 MAN1B1Q9UKM7 699 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 COL6A3P12111 3177 aa17.18■□□□□ 0.34
MBD1-207ENST00000398488 EFEMP2O95967 443 aa17.17■□□□□ 0.34
MBD1-207ENST00000398488 ALDH2P05091 517 aa17.17■□□□□ 0.34
MBD1-207ENST00000398488 PLCB3Q01970 1234 aa17.17■□□□□ 0.34
MBD1-207ENST00000398488 TUSC3Q13454 348 aa17.17■□□□□ 0.34
MBD1-207ENST00000398488 ZBTB6Q15916 424 aa17.17■□□□□ 0.34
MBD1-207ENST00000398488 ARMCX5Q6P1M9 558 aa17.17■□□□□ 0.34
MBD1-207ENST00000398488 SMARCE1Q969G3 411 aa17.17■□□□□ 0.34
MBD1-207ENST00000398488 FAM212AQ96EL1 285 aa17.17■□□□□ 0.34
MBD1-207ENST00000398488 GAS2L1Q99501 681 aaPredicted RBP17.17■□□□□ 0.34
MBD1-207ENST00000398488 RPF1Q9H9Y2 349 aaKnown RBP17.17■□□□□ 0.34
MBD1-207ENST00000398488 TOPORSQ9NS56 1045 aaPredicted RBP17.17■□□□□ 0.34
MBD1-207ENST00000398488 HSPBP1Q9NZL4 362 aa17.17■□□□□ 0.34
MBD1-207ENST00000398488 TUBGCP4Q9UGJ1 667 aa17.17■□□□□ 0.34
MBD1-207ENST00000398488 FAN1Q9Y2M0 1017 aa17.17■□□□□ 0.34
MBD1-207ENST00000398488 ANK1P16157 1881 aa17.17■□□□□ 0.34
MBD1-207ENST00000398488 PDCD11Q14690 1871 aaKnown RBP17.17■□□□□ 0.34
MBD1-207ENST00000398488 CCDC85BQ15834 202 aaPredicted RBP17.16■□□□□ 0.34
MBD1-207ENST00000398488 CBWD2Q8IUF1 395 aa17.16■□□□□ 0.34
MBD1-207ENST00000398488 C3orf58Q8NDZ4 430 aa17.16■□□□□ 0.34
MBD1-207ENST00000398488 HASPINQ8TF76 798 aa17.16■□□□□ 0.34
MBD1-207ENST00000398488 MRPL38Q96DV4 380 aaKnown RBP17.16■□□□□ 0.34
MBD1-207ENST00000398488 GSDMAQ96QA5 445 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms