RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 SLC12A4Q9UP95 1085 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 SBNO2Q9Y2G9 1366 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 SNAP23O00161 211 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 SMNDC1O75940 238 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCBE1-201ENST00000398179 S100A2P29034 98 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 HADHAP40939 763 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 C3orf33Q6P1S2 294 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 RASSF6Q6ZTQ3 369 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 MICU2Q8IYU8 434 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 M0QX08 132 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 AKAP5P24588 427 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 AK2P54819 239 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 TRIM71Q2Q1W2 868 aaKnown RBP13.48□□□□□ -0.25
CCBE1-201ENST00000398179 ANKRD53Q8N9V6 530 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 TEX47Q8TBZ9 253 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 TRPC4APQ8TEL6 797 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 COL26A1Q96A83 441 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 ZNF287Q9HBT7 754 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 RBM8AQ9Y5S9 174 aaKnown RBP13.48□□□□□ -0.25
CCBE1-201ENST00000398179 AKIRIN2Q53H80 203 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 BBS2Q9BXC9 721 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 CDC23Q9UJX2 597 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 ABCG2Q9UNQ0 655 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 GIT1Q9Y2X7 761 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 OR5F1O95221 314 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 KCNH1O95259 989 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 SLC9C1Q4G0N8 1177 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 TAF1BQ53T94 588 aaPredicted RBP13.48□□□□□ -0.25
CCBE1-201ENST00000398179 C16orf71Q8IYS4 520 aaPredicted RBP13.48□□□□□ -0.25
CCBE1-201ENST00000398179 TDRD1Q9BXT4 1180 aaKnown RBP13.48□□□□□ -0.25
CCBE1-201ENST00000398179 PAIP1Q9H074 479 aaKnown RBP13.48□□□□□ -0.25
CCBE1-201ENST00000398179 SMYD3Q9H7B4 428 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 SH3GLB2Q9NR46 395 aa13.48□□□□□ -0.25
CCBE1-201ENST00000398179 PDPK1O15530 556 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 ATP5JP18859 108 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 MAGEA10P43363 369 aaPredicted RBP13.47□□□□□ -0.25
CCBE1-201ENST00000398179 CLEC4GQ6UXB4 293 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 ARHGEF18Q6ZSZ5 1173 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 TRIM67Q6ZTA4 783 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 MAP3K1Q13233 1512 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 GYG2O15488 501 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 PEX1O43933 1283 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 DNAJC7Q99615 494 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 STK33Q9BYT3 514 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 TRIM31Q9BZY9 425 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 SNX4O95219 450 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 CPP00450 1065 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 POLR2MP0CAP2 368 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 IDO1P14902 403 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 ETV1P50549 477 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 GNG2P59768 71 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 EIF2S3LQ2VIR3 472 aaKnown RBP13.47□□□□□ -0.25
CCBE1-201ENST00000398179 MDH1BQ5I0G3 518 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 PPP4R1Q8TF05 950 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 C6orf62Q9GZU0 229 aaPredicted RBP13.47□□□□□ -0.25
CCBE1-201ENST00000398179 CDH19Q9H159 772 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 CC2D2AQ9P2K1 1620 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 MYO1GB0I1T2 1018 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 YARSP54577 528 aaKnown RBP13.47□□□□□ -0.25
CCBE1-201ENST00000398179 GIPC3Q8TF64 312 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 C1orf50Q9BV19 199 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 CACYBPQ9HB71 228 aaKnown RBP13.47□□□□□ -0.25
CCBE1-201ENST00000398179 CBX8Q9HC52 389 aa13.47□□□□□ -0.25
CCBE1-201ENST00000398179 STOX2Q9P2F5 926 aaPredicted RBP13.47□□□□□ -0.25
CCBE1-201ENST00000398179 GPR89AB7ZAQ6 455 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 GPR89BP0CG08 455 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 CPA3P15088 417 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 ATXN1P54253 815 aaKnown RBP13.46□□□□□ -0.25
CCBE1-201ENST00000398179 PPP2R5EQ16537 467 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 UBXN11Q5T124 520 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 IGSF22Q8N9C0 903 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 SLC26A7Q8TE54 656 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 INTS2Q9H0H0 1204 aaKnown RBP13.46□□□□□ -0.25
CCBE1-201ENST00000398179 TNKS2Q9H2K2 1166 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 SNRKQ9NRH2 765 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 FAM105AQ9NUU6 356 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 DNM3Q9UQ16 869 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 KIAA1107Q9UPP5 1409 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 H7C2Y5 167 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 MFAP3LO75121 409 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 PDHBP11177 359 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 SLC5A1P13866 664 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 POU1F1P28069 291 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 RAB25P57735 213 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 MYL5Q02045 173 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 RINT1Q6NUQ1 792 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 DEPTORQ8TB45 409 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 PPP1R13LQ8WUF5 828 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 RBM17Q96I25 401 aaKnown RBP13.46□□□□□ -0.25
CCBE1-201ENST00000398179 NSMCE3Q96MG7 304 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 TRIM75PA6NK02 468 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 ATP6V1G2O95670 118 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 MAPKAPK2P49137 400 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 LIG4P49917 911 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 STRN3Q13033 797 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 LRIF1Q5T3J3 769 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 TYW1BQ6NUM6 668 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 OR9Q1Q8NGQ5 310 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 ZFAND2BQ8WV99 257 aa13.46□□□□□ -0.25
CCBE1-201ENST00000398179 BORCS5Q969J3 196 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms