RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 A0A0U1RQG5 324 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 OGTO15294 1046 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 RPLP2P05387 115 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 HSPA1AP0DMV8 641 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 HSPA1BP0DMV9 641 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 FMO5P49326 533 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 CTCFP49711 727 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 MRPS6P82932 125 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 PCBP1Q15365 356 aaKnown RBP eCLIP20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 WHAMMP3Q1A5X7 153 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 SEZ6Q53EL9 994 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 ZNF569Q5MCW4 686 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 RPAINQ86UA6 219 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 TMC2Q8TDI7 906 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 PARD3BQ8TEW8 1205 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 HNRNPLLQ8WVV9 542 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 TMEM40Q8WWA1 233 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 CRACR2AQ9BSW2 395 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 PDZD7Q9H5P4 517 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 OGDHLQ9ULD0 1010 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 TRIM21P19474 475 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 C1orf220Q5T0J3 134 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 TEX35Q5T0J7 233 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 USP37Q86T82 979 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 SLC43A3Q8NBI5 491 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 NAPGQ99747 312 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 UBXN6Q9BZV1 441 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 CDT1Q9H211 546 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 RBAKQ9NYW8 714 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 LUC7L2Q9Y383 392 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 TRPV2Q9Y5S1 764 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 CDY2AQ9Y6F7 541 aa20.92■□□□□ 0.94
PDLIM2-204ENST00000397760 A0A1B0GUA9 196 aa20.91■□□□□ 0.94
PDLIM2-204ENST00000397760 FAM189A1O60320 539 aa20.91■□□□□ 0.94
PDLIM2-204ENST00000397760 PLA2G4AP47712 749 aa20.91■□□□□ 0.94
PDLIM2-204ENST00000397760 ENPEPQ07075 957 aa20.91■□□□□ 0.94
PDLIM2-204ENST00000397760 PPP3CAQ08209 521 aa20.91■□□□□ 0.94
PDLIM2-204ENST00000397760 PTK7Q13308 1070 aa20.91■□□□□ 0.94
PDLIM2-204ENST00000397760 TSR1Q2NL82 804 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-204ENST00000397760 CBWD6Q4V339 395 aa20.91■□□□□ 0.94
PDLIM2-204ENST00000397760 CBWD3Q5JTY5 395 aa20.91■□□□□ 0.94
PDLIM2-204ENST00000397760 CBWD5Q5RIA9 395 aa20.91■□□□□ 0.94
PDLIM2-204ENST00000397760 PARD6BQ9BYG5 372 aa20.91■□□□□ 0.94
PDLIM2-204ENST00000397760 FAM207AQ9NSI2 230 aaPredicted RBP20.91■□□□□ 0.94
PDLIM2-204ENST00000397760 TRIP12Q14669 1992 aaPredicted RBP20.91■□□□□ 0.94
PDLIM2-204ENST00000397760 LRRIQ3A6PVS8 624 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 MCF2P10911 925 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 THPOP40225 353 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 TNFSF9P41273 254 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 PSMD6Q15008 389 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 PKN2Q16513 984 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 EXOC3L4Q17RC7 722 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 GBP6Q6ZN66 633 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 THNSL1Q8IYQ7 743 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 POP1Q99575 1024 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 LSM14BQ9BX40 385 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 HAUS4Q9H6D7 363 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 EPN1Q9Y6I3 576 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 GTPBP10A4D1E9 387 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 ARVCFO00192 962 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 CTSHP09668 335 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 DLATP10515 647 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 HOXA11P31270 313 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 ARHGAP25P42331 645 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 GCLMP48507 274 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 MEA1Q16626 185 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 FIGNQ5HY92 759 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 MSANTD4Q8NCY6 345 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 NEK11Q8NG66 645 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 ZNF333Q96JL9 665 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 FNBP1Q96RU3 617 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 IRX2Q9BZI1 471 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 CPSF3Q9UKF6 684 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 RAB21Q9UL25 225 aa20.9■□□□□ 0.94
PDLIM2-204ENST00000397760 TTC26A0AVF1 554 aa20.89■□□□□ 0.93
PDLIM2-204ENST00000397760 N4BP1O75113 896 aaKnown RBP20.89■□□□□ 0.93
PDLIM2-204ENST00000397760 NDUFA10O95299 355 aa20.89■□□□□ 0.93
PDLIM2-204ENST00000397760 CHRNA1P02708 482 aa20.89■□□□□ 0.93
PDLIM2-204ENST00000397760 MYL7Q01449 175 aa20.89■□□□□ 0.93
PDLIM2-204ENST00000397760 ZNF771Q7L3S4 317 aaPredicted RBP20.89■□□□□ 0.93
PDLIM2-204ENST00000397760 CEP120Q8N960 986 aa20.89■□□□□ 0.93
PDLIM2-204ENST00000397760 DHX38Q92620 1227 aaKnown RBP20.89■□□□□ 0.93
PDLIM2-204ENST00000397760 ADPGKQ9BRR6 497 aa20.89■□□□□ 0.93
PDLIM2-204ENST00000397760 TTYH3Q9C0H2 523 aa20.89■□□□□ 0.93
PDLIM2-204ENST00000397760 TRPV6Q9H1D0 765 aa20.89■□□□□ 0.93
PDLIM2-204ENST00000397760 PDE11AQ9HCR9 933 aa20.89■□□□□ 0.93
PDLIM2-204ENST00000397760 RNF225M0QZC1 329 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 B4GALT4O60513 344 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 SLC9A1P19634 815 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 AXLP30530 894 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 OSTNP61366 133 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 KRT83P78385 493 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 MGAT3Q09327 533 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 NOTUMQ6P988 496 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 BRSK2Q8IWQ3 736 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 SLC35F6Q8N357 371 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 EHBP1Q8NDI1 1231 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 ACRBPQ8NEB7 543 aa20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 SENP6Q9GZR1 1112 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-204ENST00000397760 GCNT4Q9P109 453 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms