RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TCEAL5Q5H9L2 206 aa27.66■■■□□ 2.02
TSPAN4-207ENST00000397411 FAM212AQ96EL1 285 aa27.66■■■□□ 2.02
TSPAN4-207ENST00000397411 TCF25Q9BQ70 676 aa27.66■■■□□ 2.02
TSPAN4-207ENST00000397411 CXCL16Q9H2A7 254 aa27.66■■■□□ 2.02
TSPAN4-207ENST00000397411 SLC39A2Q9NP94 309 aa27.66■■■□□ 2.02
TSPAN4-207ENST00000397411 MYO7AQ13402 2215 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 SMIM28A0A1B0GU29 152 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 CASTOR2A6NHX0 329 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 TISP43B9A030 160 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 TADA2AO75478 443 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 IRS1P35568 1242 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 FAM160A1Q05DH4 1040 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 PSMD2Q13200 908 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 CAMK1Q14012 370 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 PLPP4Q5VZY2 271 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 DDX53Q86TM3 631 aaKnown RBP27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 FMR1NBQ8N0W7 255 aaPredicted RBP27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 TMEM87AQ8NBN3 555 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 SNX27Q96L92 541 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 IKZF4Q9H2S9 585 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 IGFLR1Q9H665 355 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 PLEKHA5Q9HAU0 1116 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 SLC38A7Q9NVC3 462 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 STK39Q9UEW8 545 aa27.65■■■□□ 2.02
TSPAN4-207ENST00000397411 CHD7Q9P2D1 2997 aa27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 EIF3DO15371 548 aaKnown RBP eCLIP27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 RPN1P04843 607 aaKnown RBP27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 PPP2R3AQ06190 1150 aa27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 SLC10A6Q3KNW5 377 aa27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 KMT5BQ4FZB7 885 aa27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 ALKAL1Q6UXT8 129 aa27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 EP400NLQ6ZTU2 488 aa27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 TMEM173Q86WV6 379 aaPredicted RBP27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 VPS52Q8N1B4 723 aa27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 GLIS3Q8NEA6 775 aa27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 NOC3LQ8WTT2 800 aaKnown RBP27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 RABGGTAQ92696 567 aa27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 NGRNQ9NPE2 291 aaKnown RBP27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 HOOK1Q9UJC3 728 aaKnown RBP27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 STYXL1Q9Y6J8 313 aa27.64■■■□□ 2.02
TSPAN4-207ENST00000397411 KLRC4O43908 158 aa27.63■■■□□ 2.01
TSPAN4-207ENST00000397411 CXCL14O95715 111 aa27.63■■■□□ 2.01
TSPAN4-207ENST00000397411 PRR29P0C7W0 189 aa27.63■■■□□ 2.01
TSPAN4-207ENST00000397411 CXCL8P10145 99 aa27.63■■■□□ 2.01
TSPAN4-207ENST00000397411 TNFSF9P41273 254 aa27.63■■■□□ 2.01
TSPAN4-207ENST00000397411 ACOT2P49753 483 aa27.63■■■□□ 2.01
TSPAN4-207ENST00000397411 ZNF507Q8TCN5 953 aa27.63■■■□□ 2.01
TSPAN4-207ENST00000397411 BCL7CQ8WUZ0 217 aaPredicted RBP27.63■■■□□ 2.01
TSPAN4-207ENST00000397411 PPP1R10Q96QC0 940 aaKnown RBP27.63■■■□□ 2.01
TSPAN4-207ENST00000397411 KCNE1P15382 129 aa27.62■■■□□ 2.01
TSPAN4-207ENST00000397411 HSP90AA2PQ14568 343 aaPredicted RBP27.62■■■□□ 2.01
TSPAN4-207ENST00000397411 SMC1AQ14683 1233 aaKnown RBP27.62■■■□□ 2.01
TSPAN4-207ENST00000397411 XKR4Q5GH76 650 aa27.62■■■□□ 2.01
TSPAN4-207ENST00000397411 ZBTB41Q5SVQ8 909 aa27.62■■■□□ 2.01
TSPAN4-207ENST00000397411 ARMCX5Q6P1M9 558 aa27.62■■■□□ 2.01
TSPAN4-207ENST00000397411 RBM23Q86U06 439 aaKnown RBP27.62■■■□□ 2.01
TSPAN4-207ENST00000397411 NELFCDQ8IXH7 590 aa27.62■■■□□ 2.01
TSPAN4-207ENST00000397411 TLE6Q9H808 572 aa27.62■■■□□ 2.01
TSPAN4-207ENST00000397411 CNTN3Q9P232 1028 aa27.62■■■□□ 2.01
TSPAN4-207ENST00000397411 GADD45BO75293 160 aaPredicted RBP27.61■■■□□ 2.01
TSPAN4-207ENST00000397411 LDHAP00338 332 aaKnown RBP27.61■■■□□ 2.01
TSPAN4-207ENST00000397411 GARTP22102 1010 aa27.61■■■□□ 2.01
TSPAN4-207ENST00000397411 EHHADHQ08426 723 aa27.61■■■□□ 2.01
TSPAN4-207ENST00000397411 UROC1Q96N76 676 aa27.61■■■□□ 2.01
TSPAN4-207ENST00000397411 PCIF1Q9H4Z3 704 aa27.61■■■□□ 2.01
TSPAN4-207ENST00000397411 CACNG4Q9UBN1 327 aa27.61■■■□□ 2.01
TSPAN4-207ENST00000397411 CPSF3Q9UKF6 684 aaKnown RBP27.61■■■□□ 2.01
TSPAN4-207ENST00000397411 PCDHGC5Q9Y5F6 944 aa27.61■■■□□ 2.01
TSPAN4-207ENST00000397411 UBE4BO95155 1302 aa27.61■■■□□ 2.01
TSPAN4-207ENST00000397411 LACTBL1A8MY62 500 aa27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 FSCN2O14926 492 aa27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 NCK2O43639 380 aa27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 KINO60870 393 aaKnown RBP27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 ADSSP30520 456 aa27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 SPAG1Q07617 926 aa27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 DPYDQ12882 1025 aa27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 SNW1Q13573 536 aaKnown RBP27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 ENOX2Q16206 610 aaKnown RBP27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 KIAA1841Q6NSI8 718 aa27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 EPM2AIP1Q7L775 607 aaPredicted RBP27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 CD302Q8IX05 232 aa27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 ENGASEQ8NFI3 743 aa27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 HLA-CQ95604 372 aa27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 KIF12Q96FN5 646 aa27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 DDX27Q96GQ7 796 aaKnown RBP27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 ZMAT2Q96NC0 199 aaKnown RBP27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 FAM213AQ9BRX8 229 aa27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 MARCH5Q9NX47 278 aa27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 ADAM28Q9UKQ2 775 aa27.6■■■□□ 2.01
TSPAN4-207ENST00000397411 XPOTO43592 962 aaKnown RBP27.59■■■□□ 2.01
TSPAN4-207ENST00000397411 PRPF40AO75400 957 aaKnown RBP27.59■■■□□ 2.01
TSPAN4-207ENST00000397411 NRIP1P48552 1158 aa27.59■■■□□ 2.01
TSPAN4-207ENST00000397411 NAB2Q15742 525 aa27.59■■■□□ 2.01
TSPAN4-207ENST00000397411 DCLRE1AQ6PJP8 1040 aa27.59■■■□□ 2.01
TSPAN4-207ENST00000397411 HS2ST1Q7LGA3 356 aa27.59■■■□□ 2.01
TSPAN4-207ENST00000397411 SCFD1Q8WVM8 642 aa27.59■■■□□ 2.01
TSPAN4-207ENST00000397411 SAAL1Q96ER3 474 aa27.59■■■□□ 2.01
TSPAN4-207ENST00000397411 TIGD1Q96MW7 591 aa27.59■■■□□ 2.01
TSPAN4-207ENST00000397411 PAAF1Q9BRP4 392 aa27.59■■■□□ 2.01
TSPAN4-207ENST00000397411 PRDM6Q9NQX0 595 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms