RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PRG3Q9Y2Y8 225 aaPredicted RBP23.12■■□□□ 1.29
TSPAN4-206ENST00000397408 MEFVO15553 781 aaPredicted RBP23.11■■□□□ 1.29
TSPAN4-206ENST00000397408 ADSSP30520 456 aa23.11■■□□□ 1.29
TSPAN4-206ENST00000397408 UBE2HP62256 183 aa23.11■■□□□ 1.29
TSPAN4-206ENST00000397408 PLCB3Q01970 1234 aa23.11■■□□□ 1.29
TSPAN4-206ENST00000397408 NELFCDQ8IXH7 590 aa23.11■■□□□ 1.29
TSPAN4-206ENST00000397408 ZNF507Q8TCN5 953 aa23.11■■□□□ 1.29
TSPAN4-206ENST00000397408 BCL7CQ8WUZ0 217 aaPredicted RBP23.11■■□□□ 1.29
TSPAN4-206ENST00000397408 SCFD1Q8WVM8 642 aa23.11■■□□□ 1.29
TSPAN4-206ENST00000397408 CCDC47Q96A33 483 aaKnown RBP23.11■■□□□ 1.29
TSPAN4-206ENST00000397408 AGO2Q9UKV8 859 aaKnown RBP23.11■■□□□ 1.29
TSPAN4-206ENST00000397408 FAN1Q9Y2M0 1017 aa23.11■■□□□ 1.29
TSPAN4-206ENST00000397408 EYSQ5T1H1 3165 aa23.11■■□□□ 1.29
TSPAN4-206ENST00000397408 COL6A3P12111 3177 aa23.11■■□□□ 1.29
TSPAN4-206ENST00000397408 NRP1O14786 923 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 KINO60870 393 aaKnown RBP23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 PRPF40AO75400 957 aaKnown RBP23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 ALDH2P05091 517 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 HOXD13P35453 343 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 KRT17Q04695 432 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 UBE3AQ05086 875 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 STK4Q13043 487 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 TUSC3Q13454 348 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 PNOCQ13519 176 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 CAMK1Q14012 370 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 SLC10A6Q3KNW5 377 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 XKR4Q5GH76 650 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 ALKAL1Q6UXT8 129 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 CLEC17AQ6ZS10 378 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 KIAA0895Q8NCT3 520 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 PPM1EQ8WY54 764 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 IGSF21Q96ID5 467 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 TIGD1Q96MW7 591 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 CNTN3Q9P232 1028 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 CACNG4Q9UBN1 327 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 ATG2AQ2TAZ0 1938 aa23.1■■□□□ 1.29
TSPAN4-206ENST00000397408 SMIM28A0A1B0GU29 152 aa23.09■■□□□ 1.29
TSPAN4-206ENST00000397408 CASTOR2A6NHX0 329 aa23.09■■□□□ 1.29
TSPAN4-206ENST00000397408 PSMD2Q13200 908 aa23.09■■□□□ 1.29
TSPAN4-206ENST00000397408 NAB2Q15742 525 aa23.09■■□□□ 1.29
TSPAN4-206ENST00000397408 CCDC85BQ15834 202 aaPredicted RBP23.09■■□□□ 1.29
TSPAN4-206ENST00000397408 TIGD5Q53EQ6 642 aa23.09■■□□□ 1.29
TSPAN4-206ENST00000397408 PPP1R10Q96QC0 940 aaKnown RBP23.09■■□□□ 1.29
TSPAN4-206ENST00000397408 CBWD1Q9BRT8 395 aa23.09■■□□□ 1.29
TSPAN4-206ENST00000397408 RPF1Q9H9Y2 349 aaKnown RBP23.09■■□□□ 1.29
TSPAN4-206ENST00000397408 TLR9Q9NR96 1032 aa23.09■■□□□ 1.29
TSPAN4-206ENST00000397408 PUF60Q9UHX1 559 aaKnown RBP23.09■■□□□ 1.29
TSPAN4-206ENST00000397408 CPSF3Q9UKF6 684 aaKnown RBP23.09■■□□□ 1.29
TSPAN4-206ENST00000397408 LZTS1Q9Y250 596 aa23.09■■□□□ 1.29
TSPAN4-206ENST00000397408 RHOBTB3O94955 611 aa23.08■■□□□ 1.29
TSPAN4-206ENST00000397408 SLC34A2O95436 690 aa23.08■■□□□ 1.29
TSPAN4-206ENST00000397408 GARTP22102 1010 aa23.08■■□□□ 1.29
TSPAN4-206ENST00000397408 ACOT2P49753 483 aa23.08■■□□□ 1.29
TSPAN4-206ENST00000397408 ENOX2Q16206 610 aaKnown RBP23.08■■□□□ 1.29
TSPAN4-206ENST00000397408 BMT2Q1RMZ1 405 aa23.08■■□□□ 1.29
TSPAN4-206ENST00000397408 ARMCX5Q6P1M9 558 aa23.08■■□□□ 1.29
TSPAN4-206ENST00000397408 RABGGTAQ92696 567 aa23.08■■□□□ 1.29
TSPAN4-206ENST00000397408 ZMAT2Q96NC0 199 aaKnown RBP23.08■■□□□ 1.29
TSPAN4-206ENST00000397408 MARCH5Q9NX47 278 aa23.08■■□□□ 1.29
TSPAN4-206ENST00000397408 HOOK1Q9UJC3 728 aaKnown RBP23.08■■□□□ 1.29
TSPAN4-206ENST00000397408 KCNE1P15382 129 aa23.08■■□□□ 1.28
TSPAN4-206ENST00000397408 IRS1P35568 1242 aa23.08■■□□□ 1.28
TSPAN4-206ENST00000397408 PPP2R3AQ06190 1150 aa23.08■■□□□ 1.28
TSPAN4-206ENST00000397408 KCNB1Q14721 858 aa23.08■■□□□ 1.28
TSPAN4-206ENST00000397408 SAAL1Q96ER3 474 aa23.08■■□□□ 1.28
TSPAN4-206ENST00000397408 PAAF1Q9BRP4 392 aa23.08■■□□□ 1.28
TSPAN4-206ENST00000397408 PLEKHA5Q9HAU0 1116 aa23.08■■□□□ 1.28
TSPAN4-206ENST00000397408 TTC26A0AVF1 554 aa23.07■■□□□ 1.28
TSPAN4-206ENST00000397408 F8W810 466 aa23.07■■□□□ 1.28
TSPAN4-206ENST00000397408 ERCC4Q92889 916 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-206ENST00000397408 GBP4Q96PP9 640 aa23.07■■□□□ 1.28
TSPAN4-206ENST00000397408 FAM213AQ9BRX8 229 aa23.07■■□□□ 1.28
TSPAN4-206ENST00000397408 PCIF1Q9H4Z3 704 aa23.07■■□□□ 1.28
TSPAN4-206ENST00000397408 NSUN3Q9H649 340 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-206ENST00000397408 GOLGA2P5Q9HBQ8 144 aa23.07■■□□□ 1.28
TSPAN4-206ENST00000397408 AGPAT3Q9NRZ7 376 aa23.07■■□□□ 1.28
TSPAN4-206ENST00000397408 SLC38A7Q9NVC3 462 aa23.07■■□□□ 1.28
TSPAN4-206ENST00000397408 PCDHGC5Q9Y5F6 944 aa23.07■■□□□ 1.28
TSPAN4-206ENST00000397408 PDCD11Q14690 1871 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-206ENST00000397408 LACTBL1A8MY62 500 aa23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 TGFB1I1O43294 461 aa23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 ERVFC1P60507 584 aa23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 SOX4Q06945 474 aaPredicted RBP23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 SPAG1Q07617 926 aa23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 HSP90AA2PQ14568 343 aaPredicted RBP23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 KNOP1Q1ED39 458 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 ZSWIM2Q8NEG5 633 aa23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 MICAL1Q8TDZ2 1067 aa23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 NOC3LQ8WTT2 800 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 FAM212AQ96EL1 285 aa23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 KIF12Q96FN5 646 aa23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 TCF25Q9BQ70 676 aa23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 COLEC11Q9BWP8 271 aa23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 VN1R3Q9BXE9 311 aa23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 ENTPD7Q9NQZ7 604 aa23.06■■□□□ 1.28
TSPAN4-206ENST00000397408 PRUNE2Q8WUY3 3088 aa23.05■■□□□ 1.28
TSPAN4-206ENST00000397408 SMC2O95347 1197 aa23.05■■□□□ 1.28
TSPAN4-206ENST00000397408 TCEAL5Q5H9L2 206 aa23.05■■□□□ 1.28
TSPAN4-206ENST00000397408 PLPP4Q5VZY2 271 aa23.05■■□□□ 1.28
TSPAN4-206ENST00000397408 CRELD2Q6UXH1 353 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms