RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 UBE3CQ15386 1083 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 C10orf76Q5T2E6 689 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 SNX30Q5VWJ9 437 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 ARHGEF18Q6ZSZ5 1173 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 CNGA4Q8IV77 575 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 TMEM151BQ8IW70 566 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 BRSK2Q8IWQ3 736 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 IER2Q9BTL4 223 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 HAUS4Q9H6D7 363 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 ATPIF1Q9UII2 106 aa9.46□□□□□ -0.89
MSH5-205ENST00000395853 CNOT7Q9UIV1 285 aaKnown RBP9.46□□□□□ -0.89
MSH5-205ENST00000395853 A0A0B4J203 849 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 HAT1O14929 419 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 MFAP3LO75121 409 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 TSPAN9O75954 239 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 ENO2P09104 434 aaPredicted RBP9.46□□□□□ -0.9
MSH5-205ENST00000395853 CCNB1P14635 433 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 RASA1P20936 1047 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 RPS12P25398 132 aaKnown RBP9.46□□□□□ -0.9
MSH5-205ENST00000395853 BASP1P80723 227 aaKnown RBP9.46□□□□□ -0.9
MSH5-205ENST00000395853 PFKPQ01813 784 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 RBL2Q08999 1139 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 SF3A3Q12874 501 aaKnown RBP eCLIP9.46□□□□□ -0.93e-6■■■■□ 23.4
MSH5-205ENST00000395853 WASHC2DQ5SRD0 308 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 PRPF38BQ5VTL8 546 aaKnown RBP9.46□□□□□ -0.9
MSH5-205ENST00000395853 TUBA3EQ6PEY2 450 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 FIP1L1Q6UN15 594 aaKnown RBP9.46□□□□□ -0.9
MSH5-205ENST00000395853 MB21D2Q8IYB1 491 aaPredicted RBP9.46□□□□□ -0.9
MSH5-205ENST00000395853 TRIML2Q8N7C3 387 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 C2orf69Q8N8R5 385 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 NPLOC4Q8TAT6 608 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 EPB41L1Q9H4G0 881 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 KRT82Q9NSB4 513 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 DDX18Q9NVP1 670 aaKnown RBP9.46□□□□□ -0.9
MSH5-205ENST00000395853 GID8Q9NWU2 228 aa9.46□□□□□ -0.9
MSH5-205ENST00000395853 FAF1Q9UNN5 650 aaPredicted RBP9.46□□□□□ -0.9
MSH5-205ENST00000395853 DOCK2Q92608 1830 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 ANO9A1A5B4 782 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 PTPDC1A2A3K4 754 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 GOLGA8IPA6NC78 632 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 FAM155AB1AL88 458 aaPredicted RBP9.45□□□□□ -0.9
MSH5-205ENST00000395853 DDHD2O94830 711 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 FAM153BP0C7A2 387 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 GM2AP17900 193 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 ANXA13P27216 316 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 GTF2H1P32780 548 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 PCYT1AP49585 367 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 AMPD3Q01432 767 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 SPCS2Q15005 226 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 FAM153CQ494X1 144 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 AGBL2Q5U5Z8 902 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 ZNF746Q6NUN9 644 aaPredicted RBP9.45□□□□□ -0.9
MSH5-205ENST00000395853 TTC23LQ6PF05 361 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 ZNF598Q86UK7 904 aaKnown RBP9.45□□□□□ -0.9
MSH5-205ENST00000395853 MAGEB6Q8N7X4 407 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 SPATA4Q8NEY3 305 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 TRPM4Q8TD43 1214 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 CPLX3Q8WVH0 158 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 GLMNQ92990 594 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 EFHD2Q96C19 240 aaPredicted RBP9.45□□□□□ -0.9
MSH5-205ENST00000395853 ERP27Q96DN0 273 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 ZNF274Q96GC6 653 aaPredicted RBP9.45□□□□□ -0.9
MSH5-205ENST00000395853 USP28Q96RU2 1077 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 STRBPQ96SI9 672 aaKnown RBP9.45□□□□□ -0.9
MSH5-205ENST00000395853 MAP3K14Q99558 947 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 DPH5Q9H2P9 285 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 ETNK1Q9HBU6 452 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 HACD3Q9P035 362 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 FAM153AQ9UHL3 310 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 NFU1Q9UMS0 254 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 DOLKQ9UPQ8 538 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 RTL9Q8NET4 1388 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 FUOMA2VDF0 154 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 ARHGAP33O14559 1287 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 SHBGP04278 402 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 PABPC1P11940 636 aaKnown RBP9.45□□□□□ -0.9
MSH5-205ENST00000395853 FECHP22830 423 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 GNA11P29992 359 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 HOXD13P35453 343 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 ADCY8P40145 1251 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 THOP1P52888 689 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 GRAPQ13588 217 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 DPYSQ14117 519 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 HSP90AA4PQ58FG1 418 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 HAUS3Q68CZ6 603 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 C8orf74Q6P047 294 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 ZNF572Q7Z3I7 529 aaPredicted RBP9.45□□□□□ -0.9
MSH5-205ENST00000395853 TBC1D10CQ8IV04 446 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 VPS52Q8N1B4 723 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 LSMEM1Q8N8F7 131 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 GRAPLQ8TC17 118 aaPredicted RBP9.45□□□□□ -0.9
MSH5-205ENST00000395853 GIPC3Q8TF64 312 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 UTP4Q969X6 686 aaKnown RBP9.45□□□□□ -0.9
MSH5-205ENST00000395853 COX4I2Q96KJ9 171 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 LLPHQ9BRT6 129 aaKnown RBP9.45□□□□□ -0.9
MSH5-205ENST00000395853 MUC3BQ9H195 1237 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 GBA2Q9HCG7 927 aaPredicted RBP9.45□□□□□ -0.9
MSH5-205ENST00000395853 GGT7Q9UJ14 662 aa9.45□□□□□ -0.9
MSH5-205ENST00000395853 LRRC37AA6NMS7 1700 aa9.44□□□□□ -0.9
MSH5-205ENST00000395853 FARP2O94887 1054 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms