RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 PLCB3Q01970 1234 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 POSTNQ15063 836 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 NFKBIBQ15653 356 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 XKR4Q5GH76 650 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 KANK3Q6NY19 840 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 STXBP4Q6ZWJ1 553 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 NELFCDQ8IXH7 590 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 KIAA0895Q8NCT3 520 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 ZSWIM2Q8NEG5 633 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 POF1BQ8WVV4 589 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 PPM1EQ8WY54 764 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 POMGNT1Q8WZA1 660 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 MRPL38Q96DV4 380 aaKnown RBP18.06■□□□□ 0.48
CXCL1-201ENST00000395761 IGSF21Q96ID5 467 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 SNX27Q96L92 541 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 TIGD1Q96MW7 591 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 ZMAT2Q96NC0 199 aaKnown RBP18.06■□□□□ 0.48
CXCL1-201ENST00000395761 TMEM175Q9BSA9 504 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 TMEM206Q9H813 350 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 TOPORSQ9NS56 1045 aaPredicted RBP18.06■□□□□ 0.48
CXCL1-201ENST00000395761 LMCD1Q9NZU5 365 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 FAN1Q9Y2M0 1017 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 F8W810 466 aa18.05■□□□□ 0.48
CXCL1-201ENST00000395761 PPM1AP35813 382 aa18.05■□□□□ 0.48
CXCL1-201ENST00000395761 OR1G1P47890 313 aa18.05■□□□□ 0.48
CXCL1-201ENST00000395761 ACOT2P49753 483 aa18.05■□□□□ 0.48
CXCL1-201ENST00000395761 PSMD2Q13200 908 aa18.05■□□□□ 0.48
CXCL1-201ENST00000395761 ENOX2Q16206 610 aaKnown RBP18.05■□□□□ 0.48
CXCL1-201ENST00000395761 PTPROQ16827 1216 aa18.05■□□□□ 0.48
CXCL1-201ENST00000395761 MAFAQ8NHW3 353 aaPredicted RBP18.05■□□□□ 0.48
CXCL1-201ENST00000395761 ERCC4Q92889 916 aaPredicted RBP18.05■□□□□ 0.48
CXCL1-201ENST00000395761 PPP1R10Q96QC0 940 aaKnown RBP18.05■□□□□ 0.48
CXCL1-201ENST00000395761 PAAF1Q9BRP4 392 aa18.05■□□□□ 0.48
CXCL1-201ENST00000395761 CBWD1Q9BRT8 395 aa18.05■□□□□ 0.48
CXCL1-201ENST00000395761 LMAN2LQ9H0V9 348 aa18.05■□□□□ 0.48
CXCL1-201ENST00000395761 CPSF3Q9UKF6 684 aaKnown RBP18.05■□□□□ 0.48
CXCL1-201ENST00000395761 AGO2Q9UKV8 859 aaKnown RBP18.05■□□□□ 0.48
CXCL1-201ENST00000395761 PRG3Q9Y2Y8 225 aaPredicted RBP18.05■□□□□ 0.48
CXCL1-201ENST00000395761 PCDHGC5Q9Y5F6 944 aa18.05■□□□□ 0.48
CXCL1-201ENST00000395761 CASTOR2A6NHX0 329 aa18.04■□□□□ 0.48
CXCL1-201ENST00000395761 LACTBL1A8MY62 500 aa18.04■□□□□ 0.48
CXCL1-201ENST00000395761 TGFB1I1O43294 461 aa18.04■□□□□ 0.48
CXCL1-201ENST00000395761 IGFBP6P24592 240 aaPredicted RBP18.04■□□□□ 0.48
CXCL1-201ENST00000395761 IRS1P35568 1242 aa18.04■□□□□ 0.48
CXCL1-201ENST00000395761 ERVFC1P60507 584 aa18.04■□□□□ 0.48
CXCL1-201ENST00000395761 SPAG1Q07617 926 aa18.04■□□□□ 0.48
CXCL1-201ENST00000395761 TUSC3Q13454 348 aa18.04■□□□□ 0.48
CXCL1-201ENST00000395761 BMT2Q1RMZ1 405 aa18.04■□□□□ 0.48
CXCL1-201ENST00000395761 CRELD2Q6UXH1 353 aaPredicted RBP18.04■□□□□ 0.48
CXCL1-201ENST00000395761 VN1R3Q9BXE9 311 aa18.04■□□□□ 0.48
CXCL1-201ENST00000395761 PCIF1Q9H4Z3 704 aa18.04■□□□□ 0.48
CXCL1-201ENST00000395761 MARCH5Q9NX47 278 aa18.04■□□□□ 0.48
CXCL1-201ENST00000395761 CNTN3Q9P232 1028 aa18.04■□□□□ 0.48
CXCL1-201ENST00000395761 PRRC2BQ5JSZ5 2229 aaKnown RBP18.04■□□□□ 0.48
CXCL1-201ENST00000395761 PLXNA4Q9HCM2 1894 aa18.03■□□□□ 0.48
CXCL1-201ENST00000395761 TTC26A0AVF1 554 aa18.03■□□□□ 0.48
CXCL1-201ENST00000395761 RHOBTB3O94955 611 aa18.03■□□□□ 0.48
CXCL1-201ENST00000395761 KCNE1P15382 129 aa18.03■□□□□ 0.48
CXCL1-201ENST00000395761 KRT17Q04695 432 aa18.03■□□□□ 0.48
CXCL1-201ENST00000395761 UBE3AQ05086 875 aa18.03■□□□□ 0.48
CXCL1-201ENST00000395761 SOX4Q06945 474 aaPredicted RBP18.03■□□□□ 0.48
CXCL1-201ENST00000395761 KYAT1Q16773 422 aa18.03■□□□□ 0.48
CXCL1-201ENST00000395761 TMEM130Q8N3G9 435 aa18.03■□□□□ 0.48
CXCL1-201ENST00000395761 C18orf25Q96B23 403 aaPredicted RBP18.03■□□□□ 0.48
CXCL1-201ENST00000395761 SAAL1Q96ER3 474 aa18.03■□□□□ 0.48
CXCL1-201ENST00000395761 TMEM169Q96HH4 297 aa18.03■□□□□ 0.48
CXCL1-201ENST00000395761 CCDC34Q96HJ3 373 aa18.03■□□□□ 0.48
CXCL1-201ENST00000395761 RPF1Q9H9Y2 349 aaKnown RBP18.03■□□□□ 0.48
CXCL1-201ENST00000395761 LZTS1Q9Y250 596 aa18.03■□□□□ 0.48
CXCL1-201ENST00000395761 UBE4BO95155 1302 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 GOLGA8IPA6NC78 632 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 GOLGA8JA6NMD2 632 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 KINO60870 393 aaKnown RBP18.02■□□□□ 0.48
CXCL1-201ENST00000395761 SLC34A2O95436 690 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 MBD3O95983 291 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 GARTP22102 1010 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 KCNB1Q14721 858 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 DDX53Q86TM3 631 aaKnown RBP18.02■□□□□ 0.48
CXCL1-201ENST00000395761 ELOA2Q8IYF1 753 aaPredicted RBP18.02■□□□□ 0.48
CXCL1-201ENST00000395761 GPT2Q8TD30 523 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 MICAL1Q8TDZ2 1067 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 CCDC47Q96A33 483 aaKnown RBP18.02■□□□□ 0.48
CXCL1-201ENST00000395761 FAM212AQ96EL1 285 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 FAM213AQ9BRX8 229 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 COLEC11Q9BWP8 271 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 PLEKHA5Q9HAU0 1116 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 GOLGA2P5Q9HBQ8 144 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 TLR9Q9NR96 1032 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 PUF60Q9UHX1 559 aaKnown RBP18.02■□□□□ 0.48
CXCL1-201ENST00000395761 PCDHA5Q9Y5H7 936 aa18.02■□□□□ 0.48
CXCL1-201ENST00000395761 TDRD15B5MCY1 1934 aaKnown RBP18.02■□□□□ 0.47
CXCL1-201ENST00000395761 FSCN2O14926 492 aa18.01■□□□□ 0.47
CXCL1-201ENST00000395761 CLIC2O15247 247 aa18.01■□□□□ 0.47
CXCL1-201ENST00000395761 ADRB2P07550 413 aa18.01■□□□□ 0.47
CXCL1-201ENST00000395761 CLCNKBP51801 687 aa18.01■□□□□ 0.47
CXCL1-201ENST00000395761 PPP2R3AQ06190 1150 aa18.01■□□□□ 0.47
CXCL1-201ENST00000395761 HSP90AA2PQ14568 343 aaPredicted RBP18.01■□□□□ 0.47
CXCL1-201ENST00000395761 KNOP1Q1ED39 458 aaKnown RBP18.01■□□□□ 0.47
CXCL1-201ENST00000395761 SKOR2Q2VWA4 1001 aaPredicted RBP18.01■□□□□ 0.47
CXCL1-201ENST00000395761 ARMCX5Q6P1M9 558 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms