RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 ACTL7AQ9Y615 435 aa4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 CFAP20Q9Y6A4 193 aaKnown RBP4.04□□□□□ -1.76
RNU6-550P-201ENST00000391057 PPM1GO15355 546 aaPredicted RBP4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 SGTAO43765 313 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 ABLIM3O94929 683 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 AMY1AP04745 511 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 PF4V1P10720 104 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 INSRRP14616 1297 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 DDCP20711 480 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 FPR1P21462 350 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 EDNRBP24530 442 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 PCSK1P29120 753 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 ATXN7L2Q5T6C5 722 aaPredicted RBP4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 DRICH1Q6PGQ1 229 aaPredicted RBP4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 ZGPATQ8N5A5 531 aaKnown RBP4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 IL17DQ8TAD2 202 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 SLC35B2Q8TB61 432 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 RAB24Q969Q5 203 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 FAM193BQ96PV7 902 aaPredicted RBP4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 NUP88Q99567 741 aaPredicted RBP4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 NDC1Q9BTX1 674 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 PARPBPQ9NWS1 579 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 EIF2B4Q9UI10 523 aaKnown RBP4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 ZNF180Q9UJW8 692 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 SORCS3Q9UPU3 1222 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 MYRFQ9Y2G1 1151 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 ANKRD6Q9Y2G4 727 aa4.03□□□□□ -1.76
RNU6-550P-201ENST00000391057 XDHP47989 1333 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 WNT10BO00744 389 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 TRIM24O15164 1050 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 AKAP10O43572 662 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 RECQL4O94761 1208 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 ZSCAN20P17040 1043 aaPredicted RBP4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 RAB27AP51159 221 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 CREMQ03060 361 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 TARDBPQ13148 414 aaKnown RBP eCLIP4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 PUM1Q14671 1186 aaKnown RBP eCLIP4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 RAB39AQ14964 217 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 OTUD7BQ6GQQ9 843 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 ZNF529Q6P280 563 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 GADL1Q6ZQY3 521 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 SEM1Q6ZVN7 128 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 TTC7BQ86TV6 843 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 PLXDC1Q8IUK5 500 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 JDP2Q8WYK2 163 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 PLEKHG4BQ96PX9 1271 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 VPS11Q9H270 941 aa4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 THRAP3Q9Y2W1 955 aaKnown RBP4.02□□□□□ -1.77
RNU6-550P-201ENST00000391057 MATN3O15232 486 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 FAM20BO75063 409 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 SCAF4O95104 1147 aaKnown RBP4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 POMCP01189 267 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 AMHP03971 560 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 C1SP09871 688 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 ALAS1P13196 640 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 PDCP20941 246 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 AKAP5P24588 427 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 APOBEC3AP31941 199 aaPredicted RBP4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 CTXN1P60606 82 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 ATP8B2P98198 1209 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 NHLH2Q02577 135 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 FOXE3Q13461 319 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 TOB2Q14106 344 aaPredicted RBP4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 CSRP2Q16527 193 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 ZXDCQ2QGD7 858 aaPredicted RBP4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 RABL3Q5HYI8 236 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 DBX2Q6ZNG2 339 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 USP45Q70EL2 814 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 CATIPQ7Z7H3 387 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 IFI44Q8TCB0 444 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 CPT1CQ8TCG5 803 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 NSUN6Q8TEA1 469 aaKnown RBP4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 CACTINQ8WUQ7 758 aaKnown RBP4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 JPH3Q8WXH2 748 aaPredicted RBP4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 CLPTM1LQ96KA5 538 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 PHACTR3Q96KR7 559 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 CAMKK2Q96RR4 588 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 DCLRE1CQ96SD1 692 aaKnown RBP4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 MYOCQ99972 504 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 RTFDC1Q9BY42 306 aaPredicted RBP4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 ZNF341Q9BYN7 854 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 RHOBTB2Q9BYZ6 727 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 C11orf54Q9H0W9 315 aaPredicted RBP4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 CDH19Q9H159 772 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 ZNF703Q9H7S9 590 aaPredicted RBP4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 ZIM2Q9NZV7 527 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 CALCOCO1Q9P1Z2 691 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 CEP72Q9P209 647 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 SLC23A1Q9UHI7 598 aa4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 PNMA8BQ9ULN7 279 aaPredicted RBP4.01□□□□□ -1.77
RNU6-550P-201ENST00000391057 DIRC3C9JPN6 131 aa4□□□□□ -1.77
RNU6-550P-201ENST00000391057 LEFTY2O00292 366 aa4□□□□□ -1.77
RNU6-550P-201ENST00000391057 KIAA0391O15091 583 aaKnown RBP4□□□□□ -1.77
RNU6-550P-201ENST00000391057 PLSCR1O15162 318 aa4□□□□□ -1.77
RNU6-550P-201ENST00000391057 POU2F2P09086 479 aa4□□□□□ -1.77
RNU6-550P-201ENST00000391057 SPATA31D3P0C874 917 aa4□□□□□ -1.77
RNU6-550P-201ENST00000391057 CHN2P52757 468 aa4□□□□□ -1.77
RNU6-550P-201ENST00000391057 RNASE9P60153 205 aaKnown RBP4□□□□□ -1.77
RNU6-550P-201ENST00000391057 MIIPQ5JXC2 388 aa4□□□□□ -1.77
RNU6-550P-201ENST00000391057 IFIT1BQ5T764 474 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms