RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 WDR17Q8IZU2 1322 aa-0.14□□□□□ -2.43
TRAJ28-201ENST00000390509 TCF20Q9UGU0 1960 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 SETD1BQ9UPS6 1966 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 IGLV5-39A0A0G2JS06 123 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 A0A0J9YWU9 116 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 PLSCR5A0PG75 271 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM221AA4D161 298 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM83GA6ND36 823 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM196BA6NMK8 535 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 LINC00473A8K010 186 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 KRTAP16-1A8MUX0 517 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 UPK3BL1B0FP48 263 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 PRR5-ARHGAP8B1AHC4 643 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 CHURC1-FNTBB4DL54 471 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 UPK3BL2E5RIL1 263 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM72CH0Y354 149 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 SMIM22K7EJ46 135 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 STXBP3O00186 592 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 LEFTY2O00292 366 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 KRIT1O00522 736 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FCHO1O14526 889 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 NRP1O14786 923 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 AURKAO14965 403 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 DSCR3O14972 297 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 EPHB6O15197 1021 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 SLC16A5O15375 505 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 YY2O15391 372 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 MPPED1O15442 326 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ASAP2O43150 1006 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 B4GALT2O60909 372 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 DNAJC6O75061 913 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 CPNE3O75131 537 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 H2AFYO75367 372 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 TCEA3O75764 348 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ZMYND10O75800 440 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 DGKIO75912 1065 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 JTBO76095 146 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 URI1O94763 535 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 USP1O94782 785 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 UBOX5O94941 541 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 SYF2O95926 243 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 CFIP05156 583 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 JUNP05412 331 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 F7P08709 466 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ACAA1P09110 424 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FRMD6-AS1P0C7T7 363 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 VSIG10L2P0DP72 767 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 RBP3P10745 1247 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 RAG1P15918 1043 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 MGMTP16455 207 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FAHP16930 419 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ATP5F1P24539 256 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FPR2P25090 351 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 MGAT1P26572 445 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 IL1R2P27930 398 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ARRB2P32121 409 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 MLH1P40692 756 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 STAT3P40763 770 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 PTGDSP41222 190 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ABL2P42684 1182 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 NKX2-1P43699 371 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 CCR10P46092 362 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 EIF1AXP47813 144 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 STAT5BP51692 787 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 WNT3AP56704 352 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 RPL11P62913 178 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ADAM8P78325 824 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 IL13RA1P78552 427 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 EWSR1Q01844 656 aaKnown RBP eCLIP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 GHRHRQ02643 423 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 RPL6Q02878 288 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 PRB3Q04118 309 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 GRIN1Q05586 938 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FPGSQ05932 587 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FMR1Q06787 632 aaKnown RBP eCLIP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 PDE4DQ08499 809 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 AUHQ13825 339 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 SEPT6Q14141 434 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 MLECQ14165 292 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 HABP2Q14520 560 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 SHBQ15464 509 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 STILQ15468 1287 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 TSNAXIP1Q2TAA8 658 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 PRTGQ2VWP7 1150 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 KRTAP6-1Q3LI64 71 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 CERKLQ49MI3 558 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 RBM20Q5T481 1227 aaKnown RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 ZC2HC1BQ5TFG8 222 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 STPG1Q5TH74 334 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM72AQ5TYM5 149 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 C9orf57Q5W0N0 161 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 EGFLAMQ63HQ2 1017 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 KAZNQ674X7 775 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 TMEM200BQ69YZ2 307 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 KRT39Q6A163 491 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 FAM72DQ6L9T8 149 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 DRICH1Q6PGQ1 229 aaPredicted RBP-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 OLFM4Q6UX06 510 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 DEF8Q6ZN54 512 aa-0.15□□□□□ -2.43
TRAJ28-201ENST00000390509 B4GALNT4Q76KP1 1039 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms