RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 AUHQ13825 339 aaKnown RBP18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 C10orf76Q5T2E6 689 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 SLFN11Q7Z7L1 901 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 OLIG1Q8TAK6 271 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 SLC35G2Q8TBE7 412 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 TAAR1Q96RJ0 339 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 ETNK1Q9HBU6 452 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 GPRC5CQ9NQ84 441 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 ARHGEF3Q9NR81 526 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 SPDYE5A6NIY4 337 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 KIAA0391O15091 583 aaKnown RBP18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 GH1P01241 217 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 STAT1P42224 750 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 RPL21P46778 160 aaKnown RBP18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 PALB2Q86YC2 1186 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 NIM1KQ8IY84 436 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 GPR88Q9GZN0 384 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 SEPT11Q9NVA2 429 aaKnown RBP18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 PTPN22Q9Y2R2 807 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 ASTN2O75129 1339 aaPredicted RBP18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 IGSF9BQ9UPX0 1349 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 IRF6O14896 467 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 SMIM24O75264 130 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 PHLDB3Q6NSJ2 640 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 SYCE1Q8N0S2 351 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 CBWD1Q9BRT8 395 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 PIDD1Q9HB75 910 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 TMEM120BA0PK00 339 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 H0Y3Z8 333 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 ATP9AO75110 1047 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 MYCLP12524 364 aaPredicted RBP18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 PCK1P35558 622 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 SOX5P35711 763 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 TKFCQ3LXA3 575 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 FAM83AQ86UY5 434 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 IFT74Q96LB3 600 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 RIT2Q99578 217 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 INTS2Q9H0H0 1204 aaKnown RBP18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 ZCWPW1Q9H0M4 648 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 HOMER3Q9NSC5 361 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 TAS2R14Q9NYV8 317 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 SEL1LQ9UBV2 794 aa18.92■□□□□ 0.62
SQSTM1-202ENST00000389805 GOLGA6L10A0A0M3HER8 536 aa18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 GTPBP10A4D1E9 387 aaKnown RBP18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 A6NHS1 94 aa18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 PLA2G6O60733 806 aa18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 GNAT1P11488 350 aa18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 UGCGQ16739 394 aa18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 SEPT14Q6ZU15 432 aa18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 DNAJC17Q9NVM6 304 aaKnown RBP18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 CTNNAL1Q9UBT7 734 aa18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 NENFQ9UMX5 172 aa18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 FZD1Q9UP38 647 aa18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 DDX3YO15523 660 aaKnown RBP18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 ACSL3O95573 720 aa18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 OAS1P00973 400 aaKnown RBP18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 PECAM1P16284 738 aaPredicted RBP18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 SPATA21Q7Z572 469 aa18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 WNK4Q96J92 1243 aa18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 DDX23Q9BUQ8 820 aaKnown RBP18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 MYOZ2Q9NPC6 264 aa18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 GRHL1Q9NZI5 618 aa18.91■□□□□ 0.62
SQSTM1-202ENST00000389805 TNIP1Q15025 636 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 SLC30A9Q6PML9 568 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 KCTD17Q8N5Z5 321 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 SYTL5Q8TDW5 730 aaPredicted RBP18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 ALG3Q92685 438 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 TSC22D3Q99576 134 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 STRA6Q9BX79 667 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 STK33Q9BYT3 514 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 TMEM110-MUSTN1A8MSY1 372 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 ANKRD63C9JTQ0 380 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 FOXN3O00409 490 aaPredicted RBP18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 NPEPPSP55786 919 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 RWDD2BP57060 319 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 RPS6P62753 249 aaKnown RBP18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 BFSP1Q12934 665 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 DEFB132Q7Z7B7 95 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 VPS36Q86VN1 386 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 ARHGEF2Q92974 986 aaKnown RBP18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 TMEM237Q96Q45 408 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 LBHD1Q9BQE6 289 aaPredicted RBP18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 CCDC134Q9H6E4 229 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 AGO4Q9HCK5 861 aaKnown RBP18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 CHORDC1Q9UHD1 332 aaPredicted RBP18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 MYH11P35749 1972 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 RIPK2O43353 540 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 P4HBP07237 508 aaKnown RBP18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 FERP16591 822 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 RARRES1P49788 294 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 RAD23BP54727 409 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 MXRA7P84157 204 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 MYL7Q01449 175 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 MGAT5Q09328 741 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 MTMR1Q13613 665 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 FKBP1CQ5VVH2 108 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 ANO7Q6IWH7 933 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 TAOK1Q7L7X3 1001 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 SLC30A5Q8TAD4 765 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 UTP4Q969X6 686 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms