RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 A0A1B0GUA9 196 aa23.7■■□□□ 1.38
CNEP1R1-201ENST00000389134 ZBTB39O15060 712 aa23.7■■□□□ 1.38
CNEP1R1-201ENST00000389134 MARCH6O60337 910 aa23.7■■□□□ 1.38
CNEP1R1-201ENST00000389134 TGM1P22735 817 aa23.7■■□□□ 1.38
CNEP1R1-201ENST00000389134 ELAVL2Q12926 359 aaKnown RBP23.7■■□□□ 1.38
CNEP1R1-201ENST00000389134 CAPSQ13938 189 aa23.7■■□□□ 1.38
CNEP1R1-201ENST00000389134 AXDND1Q5T1B0 1012 aaPredicted RBP23.7■■□□□ 1.38
CNEP1R1-201ENST00000389134 NPAS3Q8IXF0 933 aa23.7■■□□□ 1.38
CNEP1R1-201ENST00000389134 SLC7A14Q8TBB6 771 aa23.7■■□□□ 1.38
CNEP1R1-201ENST00000389134 DYDC2Q96IM9 177 aa23.7■■□□□ 1.38
CNEP1R1-201ENST00000389134 PAAF1Q9BRP4 392 aa23.7■■□□□ 1.38
CNEP1R1-201ENST00000389134 CCDC194A0A1B0GVG4 234 aa23.69■■□□□ 1.38
CNEP1R1-201ENST00000389134 DCDC2BA2VCK2 349 aa23.69■■□□□ 1.38
CNEP1R1-201ENST00000389134 ECI2O75521 394 aa23.69■■□□□ 1.38
CNEP1R1-201ENST00000389134 HSPA4P34932 840 aa23.69■■□□□ 1.38
CNEP1R1-201ENST00000389134 CTTNQ14247 550 aaKnown RBP23.69■■□□□ 1.38
CNEP1R1-201ENST00000389134 PABPC1LQ4VXU2 614 aaKnown RBP23.69■■□□□ 1.38
CNEP1R1-201ENST00000389134 NCAPH2Q6IBW4 605 aa23.69■■□□□ 1.38
CNEP1R1-201ENST00000389134 NEK8Q86SG6 692 aa23.69■■□□□ 1.38
CNEP1R1-201ENST00000389134 ASAP3Q8TDY4 903 aa23.69■■□□□ 1.38
CNEP1R1-201ENST00000389134 HASPINQ8TF76 798 aa23.69■■□□□ 1.38
CNEP1R1-201ENST00000389134 HAS1Q92839 578 aa23.69■■□□□ 1.38
CNEP1R1-201ENST00000389134 NAP1L4Q99733 375 aaKnown RBP23.69■■□□□ 1.38
CNEP1R1-201ENST00000389134 CACNG4Q9UBN1 327 aa23.69■■□□□ 1.38
CNEP1R1-201ENST00000389134 USP24Q9UPU5 2620 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 CPLX1O14810 134 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 B4GALT5O43286 388 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 CDC45O75419 566 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 DGAT1O75907 488 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 KIF4AO95239 1232 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 PSMA5P28066 241 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 ARL2P36404 184 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 NRLP54845 237 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 ADCY1Q08828 1119 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 RAB33AQ14088 237 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 TSSK4Q6SA08 328 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 TPH2Q8IWU9 490 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 GDE1Q9NZC3 331 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 DNMT3BQ9UBC3 853 aaKnown RBP23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 RAB23Q9ULC3 237 aa23.68■■□□□ 1.38
CNEP1R1-201ENST00000389134 CASTOR2A6NHX0 329 aa23.67■■□□□ 1.38
CNEP1R1-201ENST00000389134 CCNT1O60563 726 aaKnown RBP23.67■■□□□ 1.38
CNEP1R1-201ENST00000389134 ADRB1P08588 477 aa23.67■■□□□ 1.38
CNEP1R1-201ENST00000389134 CYP4A11Q02928 519 aa23.67■■□□□ 1.38
CNEP1R1-201ENST00000389134 FZD5Q13467 585 aa23.67■■□□□ 1.38
CNEP1R1-201ENST00000389134 CDR2LQ86X02 465 aaPredicted RBP23.67■■□□□ 1.38
CNEP1R1-201ENST00000389134 HCFC1R1Q9NWW0 138 aa23.67■■□□□ 1.38
CNEP1R1-201ENST00000389134 MRPS23Q9Y3D9 190 aaKnown RBP23.67■■□□□ 1.38
CNEP1R1-201ENST00000389134 SDK1Q7Z5N4 2213 aa23.66■■□□□ 1.38
CNEP1R1-201ENST00000389134 ADAM12O43184 909 aa23.66■■□□□ 1.38
CNEP1R1-201ENST00000389134 SLITRK3O94933 977 aa23.66■■□□□ 1.38
CNEP1R1-201ENST00000389134 BAG4O95429 457 aaKnown RBP23.66■■□□□ 1.38
CNEP1R1-201ENST00000389134 THP07101 528 aa23.66■■□□□ 1.38
CNEP1R1-201ENST00000389134 MTAPQ13126 283 aa23.66■■□□□ 1.38
CNEP1R1-201ENST00000389134 ST3GAL2Q16842 350 aa23.66■■□□□ 1.38
CNEP1R1-201ENST00000389134 SLFN12Q8IYM2 578 aa23.66■■□□□ 1.38
CNEP1R1-201ENST00000389134 ING5Q8WYH8 240 aa23.66■■□□□ 1.38
CNEP1R1-201ENST00000389134 PARD6AQ9NPB6 346 aa23.66■■□□□ 1.38
CNEP1R1-201ENST00000389134 ANKEF1Q9NU02 776 aa23.66■■□□□ 1.38
CNEP1R1-201ENST00000389134 GLRA2P23416 452 aa23.65■■□□□ 1.38
CNEP1R1-201ENST00000389134 OR1D2P34982 312 aa23.65■■□□□ 1.38
CNEP1R1-201ENST00000389134 IRX6P78412 446 aaPredicted RBP23.65■■□□□ 1.38
CNEP1R1-201ENST00000389134 SPIRE1Q08AE8 756 aa23.65■■□□□ 1.38
CNEP1R1-201ENST00000389134 PPP2R5DQ14738 602 aa23.65■■□□□ 1.38
CNEP1R1-201ENST00000389134 CPLX2Q6PUV4 134 aaKnown RBP23.65■■□□□ 1.38
CNEP1R1-201ENST00000389134 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.65■■□□□ 1.38
CNEP1R1-201ENST00000389134 MAMSTRQ6ZN01 415 aa23.65■■□□□ 1.38
CNEP1R1-201ENST00000389134 CELF5Q8N6W0 485 aaKnown RBP23.65■■□□□ 1.38
CNEP1R1-201ENST00000389134 DNASE1L2Q92874 299 aa23.65■■□□□ 1.38
CNEP1R1-201ENST00000389134 PRIMPOLQ96LW4 560 aa23.65■■□□□ 1.38
CNEP1R1-201ENST00000389134 AIFM3Q96NN9 605 aa23.65■■□□□ 1.38
CNEP1R1-201ENST00000389134 IER2Q9BTL4 223 aa23.65■■□□□ 1.38
CNEP1R1-201ENST00000389134 HEBP1Q9NRV9 189 aa23.65■■□□□ 1.38
CNEP1R1-201ENST00000389134 SPAG17Q6Q759 2223 aa23.64■■□□□ 1.38
CNEP1R1-201ENST00000389134 MAN2B1O00754 1011 aa23.64■■□□□ 1.37
CNEP1R1-201ENST00000389134 LYPLA2O95372 231 aa23.64■■□□□ 1.37
CNEP1R1-201ENST00000389134 ELSPBP1Q96BH3 223 aa23.64■■□□□ 1.37
CNEP1R1-201ENST00000389134 MCRS1Q96EZ8 462 aa23.64■■□□□ 1.37
CNEP1R1-201ENST00000389134 PLA2G2FQ9BZM2 168 aa23.64■■□□□ 1.37
CNEP1R1-201ENST00000389134 AVENQ9NQS1 362 aaPredicted RBP23.64■■□□□ 1.37
CNEP1R1-201ENST00000389134 PRMT7Q9NVM4 692 aaPredicted RBP23.64■■□□□ 1.37
CNEP1R1-201ENST00000389134 KCNJ14Q9UNX9 436 aa23.64■■□□□ 1.37
CNEP1R1-201ENST00000389134 TICRRQ7Z2Z1 1910 aa23.63■■□□□ 1.37
CNEP1R1-201ENST00000389134 PTGESO14684 152 aa23.63■■□□□ 1.37
CNEP1R1-201ENST00000389134 LRP3O75074 770 aa23.63■■□□□ 1.37
CNEP1R1-201ENST00000389134 RHOP08100 348 aa23.63■■□□□ 1.37
CNEP1R1-201ENST00000389134 LAIR1Q6GTX8 287 aa23.63■■□□□ 1.37
CNEP1R1-201ENST00000389134 PPP4R3CPQ6ZMV5 832 aa23.63■■□□□ 1.37
CNEP1R1-201ENST00000389134 POTEDQ86YR6 584 aa23.63■■□□□ 1.37
CNEP1R1-201ENST00000389134 NETO1Q8TDF5 533 aa23.63■■□□□ 1.37
CNEP1R1-201ENST00000389134 ZNF274Q96GC6 653 aaPredicted RBP23.63■■□□□ 1.37
CNEP1R1-201ENST00000389134 CCDC43Q96MW1 224 aaKnown RBP23.63■■□□□ 1.37
CNEP1R1-201ENST00000389134 EIF2AK1Q9BQI3 630 aaKnown RBP23.63■■□□□ 1.37
CNEP1R1-201ENST00000389134 CHRDQ9H2X0 955 aa23.63■■□□□ 1.37
CNEP1R1-201ENST00000389134 MTRRQ9UBK8 725 aa23.63■■□□□ 1.37
CNEP1R1-201ENST00000389134 TDGF1P13385 188 aa23.62■■□□□ 1.37
CNEP1R1-201ENST00000389134 FGFR3P22607 806 aa23.62■■□□□ 1.37
CNEP1R1-201ENST00000389134 SPEM2Q0P670 501 aa23.62■■□□□ 1.37
CNEP1R1-201ENST00000389134 TANGO2Q6ICL3 276 aa23.62■■□□□ 1.37
CNEP1R1-201ENST00000389134 HSD17B14Q9BPX1 270 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms