RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 CXCL8P10145 99 aa21.15■□□□□ 0.98
GTF3A-201ENST00000381140 DNAJB1P25685 340 aa21.15■□□□□ 0.98
GTF3A-201ENST00000381140 KRT17Q04695 432 aa21.15■□□□□ 0.98
GTF3A-201ENST00000381140 SNW1Q13573 536 aaKnown RBP21.15■□□□□ 0.98
GTF3A-201ENST00000381140 POSTNQ15063 836 aa21.15■□□□□ 0.98
GTF3A-201ENST00000381140 KANK3Q6NY19 840 aa21.15■□□□□ 0.98
GTF3A-201ENST00000381140 TMEM173Q86WV6 379 aaPredicted RBP21.15■□□□□ 0.98
GTF3A-201ENST00000381140 COLGALT2Q8IYK4 626 aa21.15■□□□□ 0.98
GTF3A-201ENST00000381140 MRPL38Q96DV4 380 aaKnown RBP21.15■□□□□ 0.98
GTF3A-201ENST00000381140 TMEM169Q96HH4 297 aa21.15■□□□□ 0.98
GTF3A-201ENST00000381140 TMEM206Q9H813 350 aa21.15■□□□□ 0.98
GTF3A-201ENST00000381140 CASTOR2A6NHX0 329 aa21.14■□□□□ 0.98
GTF3A-201ENST00000381140 EIF3DO15371 548 aaKnown RBP eCLIP21.14■□□□□ 0.98
GTF3A-201ENST00000381140 ALDH2P05091 517 aa21.14■□□□□ 0.98
GTF3A-201ENST00000381140 CLTAP09496 248 aa21.14■□□□□ 0.98
GTF3A-201ENST00000381140 EHHADHQ08426 723 aa21.14■□□□□ 0.98
GTF3A-201ENST00000381140 DPYDQ12882 1025 aa21.14■□□□□ 0.98
GTF3A-201ENST00000381140 PNOCQ13519 176 aa21.14■□□□□ 0.98
GTF3A-201ENST00000381140 GPT2Q8TD30 523 aa21.14■□□□□ 0.98
GTF3A-201ENST00000381140 MICAL1Q8TDZ2 1067 aa21.14■□□□□ 0.98
GTF3A-201ENST00000381140 BCL7CQ8WUZ0 217 aaPredicted RBP21.14■□□□□ 0.98
GTF3A-201ENST00000381140 FAM212AQ96EL1 285 aa21.14■□□□□ 0.98
GTF3A-201ENST00000381140 SNX27Q96L92 541 aa21.14■□□□□ 0.98
GTF3A-201ENST00000381140 TMEM175Q9BSA9 504 aa21.14■□□□□ 0.98
GTF3A-201ENST00000381140 PUF60Q9UHX1 559 aaKnown RBP21.14■□□□□ 0.98
GTF3A-201ENST00000381140 AGO2Q9UKV8 859 aaKnown RBP21.14■□□□□ 0.98
GTF3A-201ENST00000381140 NRP1O14786 923 aa21.13■□□□□ 0.97
GTF3A-201ENST00000381140 KINO60870 393 aaKnown RBP21.13■□□□□ 0.97
GTF3A-201ENST00000381140 ACOT2P49753 483 aa21.13■□□□□ 0.97
GTF3A-201ENST00000381140 DSC1Q08554 894 aa21.13■□□□□ 0.97
GTF3A-201ENST00000381140 TUSC3Q13454 348 aa21.13■□□□□ 0.97
GTF3A-201ENST00000381140 EPM2AIP1Q7L775 607 aaPredicted RBP21.13■□□□□ 0.97
GTF3A-201ENST00000381140 LMAN2LQ9H0V9 348 aa21.13■□□□□ 0.97
GTF3A-201ENST00000381140 RPF1Q9H9Y2 349 aaKnown RBP21.13■□□□□ 0.97
GTF3A-201ENST00000381140 SMIM28A0A1B0GU29 152 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 POU3F3P20264 500 aaPredicted RBP21.12■□□□□ 0.97
GTF3A-201ENST00000381140 CA8P35219 290 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 HOXD13P35453 343 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 PLCB3Q01970 1234 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 SPAG1Q07617 926 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 STK4Q13043 487 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 SKIV2LQ15477 1246 aaKnown RBP21.12■□□□□ 0.97
GTF3A-201ENST00000381140 SLC10A6Q3KNW5 377 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 ARMCX5Q6P1M9 558 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 ZNF507Q8TCN5 953 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 SCFD1Q8WVM8 642 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 SAAL1Q96ER3 474 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 IGSF21Q96ID5 467 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 PCIF1Q9H4Z3 704 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 TLR9Q9NR96 1032 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 LMCD1Q9NZU5 365 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 PCDHGC5Q9Y5F6 944 aa21.12■□□□□ 0.97
GTF3A-201ENST00000381140 GOLGA8IPA6NC78 632 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 GOLGA8JA6NMD2 632 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 F8W810 466 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 MEFVO15553 781 aaPredicted RBP21.11■□□□□ 0.97
GTF3A-201ENST00000381140 ADSSP30520 456 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 IRS1P35568 1242 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 UBE3AQ05086 875 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 PPP2R3AQ06190 1150 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 PSMD2Q13200 908 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 CAMK1Q14012 370 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 KYAT1Q16773 422 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 KIAA0895Q8NCT3 520 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 ERCC4Q92889 916 aaPredicted RBP21.11■□□□□ 0.97
GTF3A-201ENST00000381140 PAAF1Q9BRP4 392 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 CBWD1Q9BRT8 395 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 FAM213AQ9BRX8 229 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 ENTPD7Q9NQZ7 604 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 HOOK1Q9UJC3 728 aaKnown RBP21.11■□□□□ 0.97
GTF3A-201ENST00000381140 STYXL1Q9Y6J8 313 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 UBE4BO95155 1302 aa21.11■□□□□ 0.97
GTF3A-201ENST00000381140 CARNS1A5YM72 827 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 FAM189A1O60320 539 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 ERVFC1P60507 584 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 ENOX2Q16206 610 aaKnown RBP21.1■□□□□ 0.97
GTF3A-201ENST00000381140 TIGD5Q53EQ6 642 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 PLPP4Q5VZY2 271 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 ALKAL1Q6UXT8 129 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 ZSWIM2Q8NEG5 633 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 HASPINQ8TF76 798 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 TIGD1Q96MW7 591 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 ZMAT2Q96NC0 199 aaKnown RBP21.1■□□□□ 0.97
GTF3A-201ENST00000381140 PPP1R10Q96QC0 940 aaKnown RBP21.1■□□□□ 0.97
GTF3A-201ENST00000381140 COLEC11Q9BWP8 271 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 GOLGA2P5Q9HBQ8 144 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 MARCH5Q9NX47 278 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 CNTN3Q9P232 1028 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 LACTBL1A8MY62 500 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 SLC34A2O95436 690 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 NAB2Q15742 525 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 XKR4Q5GH76 650 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 TMC7Q7Z402 723 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 VPS52Q8N1B4 723 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 C18orf25Q96B23 403 aaPredicted RBP21.1■□□□□ 0.97
GTF3A-201ENST00000381140 KIF12Q96FN5 646 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 TCF25Q9BQ70 676 aa21.1■□□□□ 0.97
GTF3A-201ENST00000381140 NSUN3Q9H649 340 aaKnown RBP21.1■□□□□ 0.97
GTF3A-201ENST00000381140 CPSF3Q9UKF6 684 aaKnown RBP21.1■□□□□ 0.97
GTF3A-201ENST00000381140 LZTS1Q9Y250 596 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms